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Nucleic atom dist Protein atom
DA11:E.OP2/1 3.13 ARG32:A.NH1/1
DT12:E.OP2/1 2.8 ALA64:A.N/1
DT12:E.OP2/1 2.33 THR67:A.OG1/1
DA14:E.OP1/1 2.99 HIS271:A.NE2/1
DA14:E.N3/1 2.88 LYS160:A.NZ/1
DC15:E.O4'/1 3.22 LYS160:A.NZ/1
DG16:E.OP2/1 2.89 THR294:A.N/1
DC17:E.N4/1 3.2 THR298:A.OG1/1
DC22:E.OP1/1 2.78 TYR18:B.OH/1
DC22:E.OP2/1 2.55 TYR26:B.OH/1
DC22:E.N4/1 3.16 ASN73:B.ND2/1
DT23:E.OP2/1 3.04 ALA19:B.N/1
DT23:E.OP2/1 2.45 THR22:B.OG1/1
DA24:E.OP1/1 2.97 ARG141:B.NH1/1
DA24:E.OP1/1 3.12 ARG141:B.NH2/1
DA25:E.OP2/1 2.97 MET137:B.N/1
DG26:E.OP1/1 3.23 HIS267:B.N/1
DG26:E.OP2/1 3.28 GLN248:B.NE2/1
DG26:E.N2/1 3.37 LYS209:C.O/1
DG27:E.OP1/1 3.43 ARG252:B.NH1/1
DG11:F.OP1/1 2.66 SER225:B.OG/1
DG11:F.OP1/1 3.01 PHE226:B.N/1
DG11:F.OP2/1 2.88 ASN243:B.N/1
DT18:F.OP1/1 3.33 ARG32:B.NH2/1
DT19:F.OP2/1 2.83 ALA64:B.N/1
DT19:F.O4'/1 3.16 LYS209:C.NZ/1
DG20:F.N2/1 3.21 GLN145:C.OE1/1
DA21:F.OP1/1 3.17 LYS209:C.NZ/1
DA21:F.OP2/1 2.85 LYS101:B.NZ/1
DA21:F.OP2/1 3.12 TYR210:C.OH/1
DA21:F.O5'/1 3.19 LYS209:C.NZ/1
DG22:F.OP2/1 3.26 LYS101:B.N/1
DG22:F.N7/1 3 LYS66:B.NZ/1
DG23:F.OP1/1 2.97 ARG135:B.NH1/1
DT27:F.O4'/1 2.58 SER69:A.OG/1
DT27:F.N3/1 3.16 GLN68:A.NE2/1
DT27:F.O4/1 2.61 THR65:A.OG1/1
DT28:F.N3/1 2.81 SER88:A.O/1
DT30:F.OP2/1 2.61 TYR26:A.OH/1
DT31:F.OP2/1 2.93 ALA19:A.N/1
DT31:F.OP2/1 2.71 THR22:A.OG1/1
DT31:F.O5'/1 3 THR22:A.OG1/1
DA32:F.OP1/1 3.21 GLY161:A.N/1
DT33:F.OP1/1 2.96 MET137:A.N/1
DA34:F.OP1/1 2.77 HIS267:A.N/1
DA34:F.OP2/1 2.85 GLN248:A.NE2/1
DA11:G.OP2/1 2.9 ARG32:C.NH1/1
DT12:G.OP2/1 2.82 ALA64:C.N/1
DT12:G.OP2/1 2.58 THR67:C.OG1/1
DA14:G.OP1/1 2.78 HIS271:C.NE2/1
DA14:G.N3/1 2.92 LYS160:C.NZ/1
DC15:G.O4'/1 3.22 LYS160:C.NZ/1
DG16:G.OP2/1 2.83 THR294:C.N/1
DC17:G.N4/1 3.35 THR298:C.OG1/1
DC22:G.OP1/1 3.07 TYR18:D.OH/1
DC22:G.OP2/1 2.67 TYR26:D.OH/1
DC22:G.N4/1 3.07 ASN73:D.ND2/1
DT23:G.OP2/1 2.78 ALA19:D.N/1
DT23:G.OP2/1 2.57 THR22:D.OG1/1
DA24:G.OP1/1 2.62 ARG141:D.NH1/1
DA24:G.OP1/1 2.98 ARG141:D.NH2/1
DA25:G.OP2/1 2.88 MET137:D.N/1
DG26:G.OP1/1 2.93 THR265:D.OG1/1
DG26:G.OP1/1 3.12 HIS267:D.N/1
DG26:G.OP2/1 3.24 GLN248:D.NE2/1
DG26:G.N2/1 3.3 LYS209:A.O/1
DG27:G.OP1/1 3.17 ARG252:D.NH1/1
DG28:G.OP1/1 3.33 ARG252:D.NE/1
DG28:G.OP1/1 3.04 ARG252:D.NH2/1
DG11:H.OP1/1 2.27 SER225:D.OG/1
DG11:H.OP1/1 3.13 PHE226:D.N/1
DG11:H.OP2/1 2.98 ASN243:D.N/1
DG11:H.O6/1 3.11 LYS249:D.NZ/1
DT18:H.OP2/1 3.34 ARG32:D.NE/1
DT19:H.OP1/1 2.19 ALA205:A.O/1
DT19:H.OP2/1 2.85 THR204:A.O/1
DT19:H.OP2/1 3 ALA64:D.N/1
DT19:H.O4'/1 3.24 LYS209:A.NZ/1
DG20:H.N2/1 3.22 GLN145:A.OE1/1
DA21:H.OP1/1 2.62 LYS209:A.NZ/1
DA21:H.OP2/1 3 TYR210:A.OH/1
DA21:H.OP2/1 2.87 LYS101:D.NZ/1
DG22:H.OP2/1 3.26 LYS101:D.N/1
DG22:H.N7/1 3.01 LYS66:D.NZ/1
DG23:H.OP1/1 2.68 ARG135:D.NH1/1
DT27:H.O4'/1 2.68 SER69:C.OG/1
DT27:H.N3/1 2.9 GLN68:C.NE2/1
DT27:H.O4/1 2.74 THR65:C.OG1/1
DT27:H.O4/1 3.13 GLN68:C.NE2/1
DT28:H.O4/1 2.52 SER88:C.O/1
DT30:H.OP1/1 2.99 TYR18:C.OH/1
DT30:H.OP2/1 2.8 TYR26:C.OH/1
DT31:H.OP2/1 2.91 ALA19:C.N/1
DT31:H.OP2/1 2.8 THR22:C.OG1/1
DA32:H.OP1/1 3.22 GLY161:C.N/1
DT33:H.OP1/1 2.83 MET137:C.N/1
DA34:H.OP1/1 2.92 HIS267:C.N/1
DA34:H.OP2/1 2.66 GLN248:C.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT12:E.O4/1 2.84 45:E/1 2.97 TRP29:A.NE1/1
DA13:E.OP2/1 2.47 46:E/1 3.07 LYS66:A.N/1
DC15:E.OP1/1 2.29 41:E/1 2.86 ARG270:A.NH1/1
DG16:E.OP2/1 2.87 354:A/1 2.8 THR294:A.OG1/1
DG16:E.OP2/1 2.87 354:A/1 3.08 THR298:A.OG1/1
DA24:E.OP2/1 2.92 322:B/1 2.85 LYS21:B.N/1
DG26:E.OP2/1 2.59 42:E/1 2.96 CYS266:B.N/1
DG27:E.OP1/1 3.01 352:B/1 2.86 ARG252:B.NH1/1
DG27:E.OP1/1 3.01 352:B/1 2.8 VAL264:B.O/1
DG27:E.OP2/1 3.16 352:B/1 2.8 VAL264:B.O/1
DG27:E.O3'/1 2.9 350:C/1 2.85 ASN212:C.N/1
DG27:E.O3'/1 2.9 350:C/1 3.37 ALA213:C.N/1
DT12:F.N3/1 2.87 47:F/1 3.13 ASP231:B.OD2/1
DT19:F.O4/1 2.87 346:B/1 2.81 TRP29:B.NE1/1
DG20:F.OP1/1 2.33 45:F/1 2.86 LYS66:B.N/1
DG20:F.OP1/1 2.33 45:F/1 2.82 GLN97:B.OE1/1
DG23:F.OP1/1 3.21 334:B/1 3.11 ARG135:B.NH1/1
DA13:G.OP2/1 2.74 46:G/1 3.09 LYS66:C.N/1
DC15:G.OP1/1 2.37 44:G/1 2.94 ARG270:C.NH1/1
DG16:G.OP2/1 2.83 340:C/1 2.65 THR294:C.OG1/1
DG16:G.OP2/1 2.83 340:C/1 3.14 ASP295:C.N/1
DG16:G.OP2/1 2.83 340:C/1 3.08 THR298:C.OG1/1
DG26:G.OP2/1 2.67 42:G/1 3.05 CYS266:D.N/1
DC13:H.OP2/1 3.19 358:D/1 2.93 LYS20:D.NZ/1
DT19:H.O4/1 2.97 361:D/1 2.71 TRP29:D.NE1/1
DG20:H.OP1/1 3.05 322:D/1 2.54 LYS66:D.N/1
DG20:H.OP1/1 3.05 322:D/1 2.83 GLN97:D.OE1/1
DG20:H.O6/1 2.48 79:H/1 2.55 ASP146:A.OD2/1
DG23:H.O6/1 2.95 96:H/1 3.2 LYS66:D.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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