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Nucleic atom dist Protein atom
DG808:P.OP1/1 2.84 ARG318:A.NH2/1
DA809:P.OP2/1 2.83 ARG73:B.NH2/1
DT817:P.OP1/1 2.93 THR357:A.OG1/1
DG818:P.OP1/1 2.79 VAL364:A.N/1
DG818:P.O3'/1 3.44 ARG339:A.NH2/1
DC819:P.OP1/1 2.6 ASP366:A.N/1
DC819:P.O2/1 3.17 LYS394:A.NZ/1
DA821:P.OP1/1 2.67 GLY442:A.N/1
DA821:P.OP1/1 3.03 SER445:A.OG/1
DG853:T.O6/1 2.8 GLN584:A.NE2/1
DG854:T.OP2/1 2.52 GLY533:A.N/1
DA855:T.OP1/1 2.93 HIS607:A.NE2/1
DT856:T.OP1/1 2.79 ARG604:A.NH1/1
DT856:T.O4'/1 3.25 GLN615:A.NE2/1
DG857:T.OP1/1 3.01 VAL426:A.N/1
DG857:T.OP1/1 3.05 ARG604:A.NH2/1
DG857:T.OP2/1 2.8 ARG604:A.NH1/1
DG857:T.OP2/1 3.16 ARG604:A.NH2/1
DG858:T.N3/1 3.17 GLN439:A.OE1/1
DC859:T.OP1/1 2.66 PHE434:A.N/1
DA860:T.OP1/1 2.75 LYS404:A.N/1
DT862:T.OP1/1 3.15 ASN335:A.ND2/1
DG863:T.OP1/1 2.77 SER338:A.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG818:P.N2/1 2.91 5458:P/1 2.98 LYS394:A.NZ/1
DG818:P.N3/1 3.04 5458:P/1 2.98 LYS394:A.NZ/1
DC820:P.O2/1 2.81 5308:A/1 2.45 GLN439:A.O/1
DA821:P.N3/1 2.79 5070:P/1 2.89 ALA438:A.O/1
DA821:P.N3/1 2.79 5070:P/1 3.25 HIS653:A.NE2/1
2DT822:P.OP1/1 2.64 5219:A/1 3.01 ARG452:A.NH1/1
2DT822:P.OP1/1 2.64 5219:A/1 2.53 GLU655:A.OE2/1
DG853:T.OP1/1 2.63 5178:T/1 3.18 GLU535:A.N/1
DG854:T.N2/1 2.88 5056:T/1 2.81 ASN611:A.ND2/1
DG854:T.N3/1 3.34 5056:T/1 2.81 ASN611:A.ND2/1
DA855:T.O4'/1 2.78 5056:T/1 2.81 ASN611:A.ND2/1
DG857:T.N3/1 3.07 5086:T/1 3.19 ASN436:A.ND2/1
DC859:T.O2/1 2.89 5203:A/1 2.53 LYS394:A.NZ/1
DA860:T.O4'/1 3.07 5203:A/1 2.53 LYS394:A.NZ/1
DG863:T.OP1/1 2.72 5080:A/1 3.02 GLN266:A.NE2/1
DG863:T.OP1/1 2.72 5080:A/1 2.7 ASP340:A.OD1/1
DC865:T.N4/1 2.78 5024:T/1 3.45 LYS268:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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