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Nucleic atom dist Protein atom
DT917:X.OP1/1 2.8 THR357:F.OG1/1
DG918:X.OP1/1 2.85 VAL364:F.N/1
DG918:X.O3'/1 3.48 ARG339:F.NH2/1
DC919:X.OP1/1 2.55 ASP366:F.N/1
DA921:X.OP1/1 2.57 GLY442:F.N/1
DA921:X.OP1/1 2.91 SER445:F.OG/1
DG953:Z.O6/1 2.94 GLN584:F.NE2/1
DG954:Z.OP2/1 3.06 GLY533:F.N/1
DA955:Z.OP1/1 2.92 HIS607:F.NE2/1
DT956:Z.OP1/1 2.78 ARG604:F.NH1/1
DT956:Z.O4'/1 3.07 GLN615:F.OE1/1
DG957:Z.OP1/1 2.89 VAL426:F.N/1
DG957:Z.OP1/1 3.05 ARG604:F.NH2/1
DG957:Z.OP2/1 2.92 ARG604:F.NH1/1
DG957:Z.N2/1 3.22 GLN439:F.NE2/1
DG958:Z.N3/1 3.11 GLN439:F.NE2/1
DC959:Z.OP1/1 3.09 PHE434:F.N/1
DA960:Z.OP1/1 2.7 LYS404:F.N/1
DC961:Z.OP1/1 2.91 GLN393:F.NE2/1
DT962:Z.OP1/1 3.15 ASN335:F.ND2/1
DG963:Z.OP1/1 2.74 SER338:F.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC919:X.OP1/1 2.68 5394:X/1 2.96 ARG339:F.NH2/1
DA921:X.N3/1 2.75 5240:X/1 2.92 ALA438:F.O/1
DA921:X.N3/1 2.75 5240:X/1 3.19 HIS653:F.NE2/1
2DT922:X.OP1/1 2.85 5398:X/1 3.28 ARG452:F.NH1/1
2DT922:X.OP1/1 2.85 5398:X/1 2.93 GLU655:F.OE1/1
2DT922:X.OP1/1 2.85 5398:X/1 3.23 HIS704:F.NE2/1
DG954:Z.O3'/1 2.68 5356:F/1 2.5 TYR530:F.O/1
DG957:Z.N3/1 3.07 5082:Z/1 3.13 ASN436:F.ND2/1
DA960:Z.OP2/1 2.63 5197:Z/1 2.96 LYS404:F.NZ/1
DG963:Z.OP1/1 2.71 5148:F/1 3.02 GLN266:F.NE2/1
DG963:Z.OP1/1 2.71 5148:F/1 2.67 ASP340:F.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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