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Nucleic atom dist Protein atom
DG805:D.OP2/1 2.6 LYS339:A.NZ/1
DG806:D.OP1/1 3.03 THR301:A.N/1
DG806:D.OP2/1 2.86 THR301:A.OG1/1
DA807:D.OP2/1 2.97 GLY299:A.N/1
DT808:D.OP2/1 3.06 ARG298:A.NH1/1
DA812:D.OP1/1 2.89 GLY187:A.N/1
DA812:D.OP1/1 3.16 THR190:A.N/1
DA812:D.OP1/1 2.73 THR190:A.OG1/1
DG813:D.OP1/1 2.77 GLY185:A.N/1
DC907:E.OP2/1 2.62 THR250:A.OG1/1
DT908:E.OP1/1 3.09 ARG247:A.NH1/1
DT908:E.OP2/1 2.96 ILE248:A.N/1
DA909:E.OP2/1 2.95 ARG336:A.NH2/1
DC910:E.OP1/1 3.11 LYS243:A.N/1
DC910:E.OP2/1 3.05 SER244:A.N/1
DA912:E.OP1/1 3.04 ALA220:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG806:D.OP2/1 2.89 167:D/1 3.08 HIS285:A.NE2/1
DA807:D.OP1/1 2.94 54:D/1 3 GLY299:A.O/1
DA807:D.OP2/1 2.89 551:A/1 2.59 SER297:A.OG/1
DT808:D.OP2/1 2.57 50:D/1 3.06 SER297:A.N/1
DOC814:D.OP1/1 2.91 502:A/1 2.28 ASP105:A.OD1/1
DOC814:D.OP1/1 2.91 502:A/1 2.67 ASP105:A.OD2/1
DOC814:D.OP1/1 2.91 502:A/1 2.69 GLU106:A.OE1/1
DOC814:D.OP1/1 3.01 501:A/1 3.2 LYS159:A.NZ/1
DC907:E.OP2/1 2.61 148:E/1 2.71 ILE248:A.O/1
DC907:E.O5'/1 2.65 148:E/1 2.71 ILE248:A.O/1
DT908:E.OP2/1 2.87 53:E/1 2.92 ARG336:A.NH1/1
DA909:E.O5'/1 3.16 565:A/1 2.87 SER244:A.OG/1
DA909:E.N7/1 3.11 558:A/1 2.9 ARG336:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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