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Nucleic atom dist Protein atom
DG1805:H.OP2/1 2.97 LYS1339:B.NZ/1
DG1806:H.OP1/1 3.04 THR1301:B.N/1
DG1806:H.OP2/1 2.51 THR1301:B.OG1/1
DA1807:H.OP2/1 3.25 GLY1299:B.N/1
DT1808:H.OP2/1 2.99 ARG1298:B.NH1/1
DT1811:H.OP1/1 2.76 LYS1193:B.NZ/1
DA1812:H.OP1/1 2.91 GLY1187:B.N/1
DA1812:H.OP1/1 3.06 THR1190:B.N/1
DA1812:H.OP1/1 2.36 THR1190:B.OG1/1
DA1812:H.OP2/1 3.44 ILE1189:B.N/1
DG1813:H.OP1/1 2.9 GLY1185:B.N/1
DA1904:J.N7/1 3.17 GLU1063:B.OE1/1
DA1904:J.N6/1 2.9 LYS1066:B.NZ/1
DC1907:J.OP2/1 2.48 THR1250:B.OG1/1
DT1908:J.OP1/1 2.94 ARG1247:B.NH1/1
DT1908:J.OP2/1 3.26 ILE1248:B.N/1
DA1909:J.OP2/1 3.06 GLY1246:B.N/1
DA1909:J.OP2/1 2.7 ARG1336:B.NH2/1
DC1910:J.OP1/1 3.34 LYS1243:B.N/1
DC1910:J.OP2/1 3.04 SER1244:B.N/1
DA1912:J.OP1/1 3.29 ALA1220:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC1907:J.OP1/1 3.01 66:J/1 3.14 THR1250:B.N/1
DC1907:J.OP2/1 2.64 47:B/1 2.49 ILE1248:B.O/1
DC1907:J.O5'/1 2.89 47:B/1 2.49 ILE1248:B.O/1
DT1908:J.OP2/1 2.84 87:J/1 2.84 ARG1336:B.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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