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Nucleic atom dist Protein atom
G1:B.O2'/1 3.07 GLN296:A.NE2/1
G2:B.OP1/1 2.92 LYS402:A.N/1
U14:B.OP2/1 3.21 ARG361:A.NH2/1
C15:B.O2'/1 2.77 ASN354:A.ND2/1
G16:B.OP1/1 3.32 LYS357:A.NZ/1
C21:B.O3'/1 3.19 ARG310:A.NH2/1
G22:B.OP1/1 2.48 TYR392:A.OH/1
G22:B.OP2/1 3.16 LYS303:A.NZ/1
G22:B.O5'/1 3.23 HIS396:A.ND1/1
C23:B.OP1/1 2.59 HIS398:A.ND1/1
C31:B.OP1/1 2.98 ARG224:A.NE/1
C31:B.O2/1 2.81 TYR165:A.OH/1
A32:B.OP2/1 2.36 ARG224:A.NH2/1
A32:B.O2'/1 3.12 TYR165:A.N/1
A32:B.O2'/1 2.81 ASP291:A.OD1/1
C33:B.O2'/1 2.86 TYR99:A.OH/1
C33:B.O2/1 2.85 ALA95:A.N/1
C33:B.O2/1 2.78 GLU96:A.N/1
C33:B.N3/1 3.03 HIS97:A.N/1
C33:B.N4/1 2.98 GLU96:A.OE1/1
C34:B.O3'/1 2.79 ASP61:A.OD1/1
C34:B.O3'/1 3.06 ASP110:A.OD2/1
C34:B.O2'/1 2.96 ASP61:A.OD1/1
C34:B.O2/1 2.61 THR130:A.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
G1:B.N3/1 2.72 47:B/1 2.87 ASP291:A.O/1
G2:B.O2'/1 2.92 641:A/1 2.77 PRO295:A.O/1
C21:B.OP1/1 3.21 616:A/1 2.53 ARG310:A.NH1/1
G22:B.OP1/1 2.85 604:A/1 2.77 LYS303:A.O/1
G22:B.OP1/1 2.85 604:A/1 2.92 ARG310:A.NH1/1
G22:B.OP1/1 2.85 604:A/1 2.95 ARG310:A.NH2/1
C31:B.OP1/1 2.78 36:B/1 2.87 ASN225:A.N/1
A32:B.OP1/1 2.81 42:B/1 3.06 VAL226:A.O/1
A32:B.OP1/1 2.81 42:B/1 3.03 ASN229:A.N/1
C33:B.OP1/1 3 35:B/1 3.07 ALA163:A.N/1
C34:B.OP1/1 2.61 56:B/1 2.77 ASP110:A.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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