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Nucleic atom dist Protein atom
DG4:C.OP1/1 3.45 ARG280:B.NE/1
DA5:C.OP1/1 3.04 LYS287:B.NZ/1
DT6:C.OP1/1 2.64 LYS291:B.NZ/1
DT6:C.OP2/1 2.83 SER288:B.OG/1
DT6:C.O5'/1 3.23 SER288:B.OG/1
DT6:C.O4/1 3.05 ASN281:B.ND2/1
DG8:C.OP2/1 2.64 LYS293:A.NZ/1
DG10:C.N7/1 3.04 ARG289:A.NH2/1
DG10:C.O6/1 2.63 ARG289:A.NH1/1
DC11:C.OP2/1 2.79 ARG278:A.NE/1
DC11:C.OP2/1 3.03 ASN282:A.ND2/1
DA12:C.OP1/1 2.91 LYS269:A.NZ/1
DA12:C.OP2/1 2.46 TYR274:A.OH/1
DA12:C.N7/1 3.03 ARG278:A.NH1/1
DA12:C.N7/1 3.45 ASN281:A.OD1/1
DA12:C.N6/1 2.79 ASN281:A.OD1/1
DA104:D.OP1/1 2.83 LYS287:A.NZ/1
DT105:D.OP2/1 2.64 SER288:A.OG/1
DT105:D.O4/1 2.91 ASN281:A.ND2/1
DG107:D.O6/1 3.05 ARG289:A.NH1/1
DG109:D.O6/1 2.54 ARG289:B.NH2/1
DC110:D.OP2/1 2.83 ARG278:B.NE/1
DC110:D.OP2/1 2.95 ASN282:B.ND2/1
DA111:D.OP1/1 2.88 LYS269:B.NZ/1
DA111:D.OP2/1 2.47 TYR274:B.OH/1
DA111:D.N7/1 3.01 ARG278:B.NH1/1
DA111:D.N7/1 3.38 ASN281:B.OD1/1
DA111:D.N6/1 2.8 ASN281:B.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA5:C.OP2/1 2.76 340:B/1 2.69 ALA284:B.O/1
DA5:C.N7/1 2.85 341:B/1 2.75 ASN281:B.ND2/1
DA5:C.N6/1 3.41 341:B/1 2.75 ASN281:B.ND2/1
DT6:C.OP1/1 2.95 36:C/1 3.15 ARG295:B.NH1/1
DT6:C.OP2/1 2.99 352:B/1 2.83 SER288:B.O/1
DT7:C.OP2/1 2.87 20:C/1 2.88 SER288:B.OG/1
DT7:C.OP2/1 2.61 23:C/1 2.65 ARG295:B.NH1/1
DT7:C.OP2/1 2.61 23:C/1 3.13 ARG295:B.NH2/1
DG8:C.N7/1 2.84 21:C/1 2.98 ARG289:B.NE/1
DG10:C.OP2/1 2.71 17:C/1 2.83 ASN282:A.O/1
DG10:C.OP2/1 2.58 18:C/1 2.82 ARG286:A.NE/1
DC11:C.OP1/1 2.73 45:C/1 2.86 TYR274:A.OH/1
DA12:C.OP2/1 3.09 62:C/1 3.11 ARG278:A.NH1/1
DA104:D.OP2/1 2.8 342:A/1 2.7 ALA284:A.O/1
DA104:D.N7/1 2.73 119:D/1 2.85 ASN281:A.ND2/1
DA104:D.N6/1 3.43 119:D/1 2.85 ASN281:A.ND2/1
DT105:D.OP2/1 2.91 344:A/1 2.88 SER288:A.O/1
DT105:D.OP2/1 2.91 344:A/1 3.01 ARG295:A.NH2/1
DG107:D.N7/1 2.73 131:D/1 3.02 ARG289:A.NH1/1
DG109:D.OP1/1 2.85 162:D/1 2.88 ARG286:B.NH2/1
DG109:D.N7/1 2.24 154:D/1 2.52 ARG289:B.NH1/1
DC110:D.N4/1 2.81 126:D/1 2.96 ASN282:B.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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