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Nucleic atom dist Protein atom
DT4:B.OP1/1 3.13 LYS156:A.N/1
DT4:B.OP2/1 2.91 THR155:A.OG1/1
DC10:B.OP1/1 3.2 ASN32:A.OD1/1
DG11:B.OP1/1 2.89 LYS113:A.NZ/1
DG11:B.N3/1 3.2 ARG112:A.NH2/1
DG12:B.O4'/1 3.15 ARG112:A.NH2/1
DG7:C.OP1/1 2.91 GLY265:A.N/1
DG7:C.OP2/1 2.98 ARG264:A.NH2/1
DG8:C.N7/1 3.02 ARG264:A.NH1/1
DG8:C.N3/1 3.09 ARG76:A.NE/1
DA9:C.OP1/1 2.81 HIS74:A.NE2/1
DT10:C.OP2/1 2.93 PRO130:A.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:C.OP2/1 2.8 21:C/1 3.26 GLY263:A.O/1
DG8:C.OP2/1 2.44 17:C/1 3.04 GLU3:A.OE1/1
DG8:C.OP2/1 2.44 17:C/1 3.05 ASN174:A.N/1
DG8:C.OP2/1 2.29 28:C/1 3.18 ARG264:A.NE/1
DA9:C.OP1/1 2.64 16:C/1 2.86 LYS60:A.N/1
DA9:C.OP2/1 2.67 19:C/1 2.69 LYS60:A.NZ/1
DA9:C.OP2/1 2.61 18:C/1 2.85 GLY171:A.N/1
DC11:C.OP1/1 2.96 20:C/1 2.98 HIS118:A.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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