Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA206:C.OP1/1 3.19 ARG125:A.NH1/1
DG208:C.OP1/1 3 ARG3:A.NH1/1
DG208:C.OP1/1 3.17 ARG117:A.NH2/1
DG208:C.N2/1 3.08 THR2:A.OG1/1
DA209:C.O3'/1 3.42 VAL57:A.N/1
DA210:C.OP1/1 2.89 THR58:A.N/1
DA210:C.OP1/1 2.46 THR58:A.OG1/1
DA210:C.OP2/1 2.79 GLY55:A.N/1
DG211:C.OP1/1 2.7 TYR61:A.OH/1
DC219:D.OP1/1 3.23 LYS33:A.NZ/1
DC219:D.O2/1 3.3 ARG26:A.NH1/1
DC222:D.OP1/1 2.78 LYS86:A.N/1
DC223:D.OP1/1 2.79 ASN84:A.N/1
DC223:D.OP1/1 2.81 ASN84:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG208:C.OP1/1 2.99 1045:A/1 2.98 ARG117:A.NE/1
DG208:C.O5'/1 2.99 1086:A/1 2.91 THR2:A.O/1
DG208:C.N3/1 2.85 1010:C/1 3.27 THR2:A.N/1
DA209:C.OP1/1 2.73 1089:C/1 2.86 GLY53:A.N/1
DA209:C.O4'/1 2.79 1010:C/1 3.27 THR2:A.N/1
DA220:D.OP1/1 2.91 1104:A/1 2.66 PRO25:A.O/1
DA220:D.OP1/1 3.05 1050:A/1 2.59 ARG26:A.O/1
DA220:D.N7/1 2.52 1035:D/1 3.22 GLN71:A.NE2/1
DA220:D.N7/1 2.52 1035:D/1 3.16 THR89:A.O/1
DA220:D.N6/1 3.3 1013:A/1 2.99 GLN91:A.N/1
DC223:D.OP1/1 2.69 1066:D/1 3.19 GLY82:A.O/1
DG225:D.OP1/1 2.65 1165:D/1 3.19 LYS130:A.NZ/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text