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Nucleic atom dist Protein atom
DG208:E.OP1/1 3.01 ARG3:B.NH1/1
DG208:E.OP1/1 2.76 ARG117:B.NH2/1
DG208:E.OP2/1 3.13 LYS121:B.NZ/1
DG208:E.N2/1 3.09 THR2:B.OG1/1
DA210:E.OP1/1 2.86 THR58:B.N/1
DA210:E.OP1/1 2.55 THR58:B.OG1/1
DA210:E.OP2/1 2.45 GLY55:B.N/1
DG211:E.OP1/1 2.8 TYR61:B.OH/1
DC219:F.O2/1 3.32 ARG26:B.NH1/1
DA220:F.N6/1 3.12 THR89:B.O/1
DC222:F.OP1/1 2.76 LYS86:B.N/1
DC223:F.OP1/1 2.78 ASN84:B.N/1
DC223:F.OP1/1 2.79 ASN84:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG204:E.N3/1 2.83 1055:E/1 3.46 TRP128:B.NE1/1
DA206:E.OP1/1 3.2 1011:B/1 2.61 TYR129:B.OH/1
DG208:E.O5'/1 3.03 1074:B/1 2.75 THR2:B.O/1
DA209:E.OP1/1 2.89 1078:B/1 2.73 GLY53:B.N/1
DA209:E.OP1/1 2.89 1078:B/1 3.25 ARG117:B.NH1/1
DC223:F.O3'/1 3.23 1062:B/1 2.78 ASP14:B.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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