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Nucleic atom dist Protein atom
DG501:C.O5'/1 2.76 LYS236:B.NZ/1
DC502:C.OP2/1 2.8 LYS236:B.N/1
DC502:C.N4/1 2.73 ASP234:B.OD1/1
DA503:C.OP1/1 2.76 TYR318:B.OH/1
DA503:C.OP2/1 2.97 TYR235:B.OH/1
DG504:C.N7/1 2.99 ARG232:B.NH2/1
DG504:C.O6/1 2.86 ARG232:B.NH1/1
DA505:C.OP2/1 2.72 ASN270:B.ND2/1
DA505:C.O5'/1 2.92 ASN270:B.ND2/1
DG507:C.N7/1 3.08 ARG283:B.NH2/1
DG507:C.O6/1 2.56 ARG283:B.NH1/1
DG508:C.N7/1 2.66 ARG272:B.NH2/1
DG508:C.O6/1 3.39 ARG272:B.NH1/1
DG513:C.OP1/1 3.29 ARG51:A.NH1/1
DG513:C.OP1/1 2.7 ARG344:B.NH1/1
DA514:C.OP1/1 3.14 GLN50:A.NE2/1
DA514:C.OP2/1 2.81 ARG51:A.N/1
DG515:C.OP2/1 3.01 GLY21:A.O/1
DG515:C.N7/1 3 ARG75:A.NH1/1
DG515:C.O6/1 2.81 ARG75:A.NH2/1
DA516:C.OP2/1 2.88 SER24:A.OG/1
DA516:C.OP2/1 3.33 LYS104:A.NZ/1
DA516:C.N6/1 3.17 ARG75:A.NH1/1
DC517:C.OP2/1 2.79 ASN142:A.ND2/1
DG553:D.OP2/1 2.4 TYR118:A.OH/1
DG553:D.OP2/1 2.86 GLN122:A.NE2/1
DG553:D.N7/1 3.07 ARG32:A.NH1/1
DA555:D.OP2/1 3.21 ASN70:A.OD1/1
DG557:D.N7/1 3.39 ARG83:A.NH1/1
DG557:D.O6/1 2.88 ARG83:A.NH2/1
DG558:D.N7/1 2.88 ARG72:A.NH1/1
DG558:D.O6/1 2.93 ARG72:A.NH2/1
DC562:D.OP1/1 2.86 ARG144:A.NH2/1
DA563:D.OP1/1 2.77 ARG144:A.NH1/1
DC564:D.OP1/1 3.2 GLN250:B.OE1/1
DC564:D.OP2/1 2.86 ARG251:B.N/1
DG565:D.OP2/1 3 GLY221:B.O/1
DG565:D.N7/1 2.99 ARG275:B.NH1/1
DG565:D.O6/1 2.91 ARG275:B.NH2/1
DA566:D.OP2/1 2.81 SER224:B.OG/1
DA566:D.OP2/1 3.08 LYS304:B.NZ/1
DA566:D.N6/1 3.14 ARG275:B.NH1/1
DC567:D.OP2/1 2.95 ASN342:B.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC502:C.OP1/1 2.87 48:C/1 3.21 LYS236:B.N/1
DC502:C.OP1/1 2.87 48:C/1 3.05 ASP237:B.N/1
DG504:C.OP2/1 3.22 49:B/1 2.98 LEU244:B.N/1
DG507:C.OP2/1 2.98 83:B/1 3.25 ARG272:B.NE/1
DG507:C.OP2/1 2.98 83:B/1 2.97 ARG272:B.NH2/1
DG507:C.O5'/1 3.16 83:B/1 2.97 ARG272:B.NH2/1
DA516:C.OP2/1 2.64 20:C/1 3.07 ILE25:A.N/1
DA516:C.OP2/1 2.64 20:C/1 3.37 LYS104:A.NZ/1
DA516:C.OP2/1 2.64 20:C/1 2.81 ASN142:A.OD1/1
DA516:C.N6/1 2.94 623:A/1 3.11 ARG75:A.NH1/1
DA516:C.N6/1 2.94 623:A/1 2.9 ASP81:A.OD2/1
DC517:C.OP1/1 2.76 631:A/1 2.72 GLN139:A.O/1
DC517:C.OP1/1 2.76 631:A/1 3.09 LYS143:A.NZ/1
DC518:C.OP1/1 2.93 627:A/1 2.86 GLN139:A.OE1/1
DC518:C.OP2/1 2.65 3:C/1 2.83 LEU29:A.N/1
DC518:C.OP2/1 2.65 3:C/1 3 GLN139:A.NE2/1
DG552:D.OP2/1 2.47 33:D/1 2.71 LYS123:A.NZ/1
DG553:D.OP2/1 2.47 11:D/1 3.1 TYR35:A.OH/1
DA554:D.OP2/1 2.66 18:D/1 2.99 THR88:A.N/1
DA554:D.OP2/1 2.66 18:D/1 2.75 THR88:A.OG1/1
DA566:D.OP2/1 2.44 75:D/1 2.92 ILE225:B.N/1
DA566:D.OP2/1 2.44 75:D/1 3.2 ILE225:B.O/1
DA566:D.OP2/1 2.44 75:D/1 3.18 LYS304:B.NZ/1
DA566:D.OP2/1 2.44 75:D/1 2.97 ASN342:B.OD1/1
DA566:D.N6/1 2.94 30:B/1 2.7 ASP281:B.OD2/1
DC567:D.OP1/1 3.02 2:B/1 2.56 GLN339:B.O/1
DC568:D.OP1/1 2.62 80:D/1 2.78 GLN339:B.OE1/1
DC568:D.OP1/1 2.62 80:D/1 3.31 ASN352:B.ND2/1
DC568:D.OP2/1 2.72 15:D/1 2.99 LEU229:B.N/1
DC568:D.OP2/1 2.72 15:D/1 2.87 GLN339:B.NE2/1
DC568:D.OP2/1 2.72 15:D/1 3.09 ASN352:B.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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