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Nucleic atom dist Protein atom
DA6:B.OP2/1 2.71 LYS280:A.NZ/1
DA6:B.N3/1 3.37 ARG283:A.NH1/1
DG7:B.OP1/1 2.78 THR292:A.OG1/1
DC8:B.OP1/1 3.36 ASN294:A.ND2/1
DG9:B.OP1/1 2.52 TYR296:A.OH/1
DC10:B.OP1/1 2.99 THR233:A.N/1
DC10:B.OP1/1 2.97 LYS234:A.N/1
DA11:B.OP1/1 3.04 LYS230:A.N/1
DC8:C.OP1/1 3.01 GLY107:A.N/1
DC8:C.OP1/1 2.78 ALA110:A.N/1
DC8:C.OP2/1 2.99 SER109:A.N/1
DG9:C.OP1/1 2.71 GLY105:A.N/1
DC10:C.OP1/1 2.71 ARG254:A.NH2/1
DC10:C.O3'/1 3.12 ASP256:A.OD2/1
DG1:D.OP1/1 2.76 LYS68:A.NZ/1
DG1:D.OP2/1 2.78 LYS68:A.NZ/1
DT2:D.OP1/1 2.88 GLY66:A.N/1
DT2:D.OP1/1 2.82 ILE69:A.N/1
DT2:D.OP2/1 3.21 LYS68:A.N/1
DC3:D.OP1/1 2.88 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:B.OP1/1 2.68 195:B/1 2.73 ARG283:A.O/1
DG7:B.OP1/1 2.68 195:B/1 3.14 ILE293:A.N/1
DG7:B.N2/1 3 365:A/1 3.33 ARG258:A.NH1/1
DG7:B.N2/1 3 365:A/1 2.59 GLU295:A.OE2/1
DG7:B.N3/1 2.96 361:A/1 2.79 ARG283:A.NH1/1
DG7:B.N3/1 2.96 361:A/1 2.47 GLU295:A.OE1/1
DC8:B.OP1/1 2.94 542:A/1 2.79 ARG299:A.NH2/1
DG9:B.N2/1 3.12 371:A/1 2.75 LYS234:A.NZ/1
DC10:B.OP2/1 2.46 48:B/1 3.06 GLU232:A.N/1
DC10:B.OP2/1 2.79 461:A/1 2.71 THR233:A.OG1/1
DA11:B.OP1/1 2.85 387:A/1 2.83 LYS230:A.O/1
DT12:B.OP1/1 2.58 84:B/1 2.83 HIS134:A.N/1
DT12:B.OP1/1 3.17 391:A/1 3.02 HIS135:A.N/1
DC10:C.OP1/1 3.05 381:A/1 2.84 SER104:A.OG/1
DC10:C.OP1/1 3.05 381:A/1 2.63 ARG254:A.NE/1
DG1:D.OP1/1 2.79 7:D/1 3.02 TYR39:A.OH/1
DG1:D.OP1/1 2.79 7:D/1 2.84 LYS72:A.NZ/1
DG1:D.OP1/1 2.78 13:D/1 3.02 LYS72:A.NZ/1
DG1:D.OP2/1 2.96 21:D/1 3.2 LYS35:A.NZ/1
DC3:D.OP2/1 2.89 9:D/1 3.34 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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