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Nucleic atom dist Protein atom
DT11:C.O2/1 2.56 ARG5:A.NH2/1
DA13:C.OP1/1 2.67 THR6:A.OG1/1
DA13:C.OP1/1 3.29 GLN44:A.NE2/1
DA13:C.N7/1 3.04 ASN51:A.ND2/1
DA13:C.N6/1 3.09 ASN51:A.OD1/1
DT14:C.O4/1 3.08 LYS50:A.NZ/1
DC17:C.OP1/1 3.17 ARG31:B.NH1/1
DC17:C.OP1/1 3.02 ARG31:B.NH2/1
DG19:C.OP1/1 2.77 TYR25:B.OH/1
DG19:C.OP1/1 3.2 ARG53:B.NE/1
DG19:C.OP2/1 3.17 ARG53:B.NE/1
DG19:C.OP2/1 3.07 ARG53:B.NH2/1
DG20:C.O6/1 2.76 LYS50:B.NZ/1
DA22:D.O3'/1 2.9 LYS2:B.O/1
DA22:D.O3'/1 3.12 ARG3:B.O/1
DA22:D.N7/1 3.02 ASN51:B.ND2/1
DA22:D.N6/1 2.77 ASN51:B.OD1/1
DT23:D.OP1/1 2.58 LYS2:B.O/1
DG26:D.OP1/1 3.02 ARG31:A.NH1/1
DG26:D.OP1/1 2.88 ARG31:A.NH2/1
DG28:D.OP1/1 2.45 TYR25:A.OH/1
DG28:D.OP1/1 3.1 ARG53:A.NE/1
DG28:D.OP2/1 3.16 ARG53:A.NE/1
DG28:D.OP2/1 2.87 ARG53:A.NH2/1
DG28:D.N7/1 3.17 LYS50:A.NZ/1
DG28:D.O6/1 3.27 LYS50:A.NZ/1
DG29:D.OP1/1 2.74 LYS57:A.NZ/1
DG29:D.O6/1 2.76 LYS50:A.NZ/1
DG29:D.O6/1 2.76 LYS50:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA12:C.OP1/1 2.89 49:C/1 3.26 TRP48:A.NE1/1
DA12:C.OP2/1 2.78 124:A/1 3.2 ILE47:A.O/1
DA12:C.OP2/1 2.78 124:A/1 2.71 ASN51:A.ND2/1
DA13:C.OP2/1 2.61 45:C/1 2.93 GLN44:A.O/1
DC18:C.OP1/1 2.57 32:C/1 2.91 LEU26:B.N/1
DC18:C.OP1/1 2.57 32:C/1 2.82 ARG53:B.NH1/1
DC18:C.OP2/1 2.75 30:C/1 2.87 LYS46:B.O/1
DC18:C.OP2/1 2.75 30:C/1 3.32 ARG53:B.NH2/1
DG19:C.OP2/1 2.93 83:B/1 2.82 LYS50:B.O/1
DG20:C.N7/1 2.76 84:B/1 2.52 LYS50:B.NZ/1
DA22:D.N6/1 3.39 87:B/1 2.89 LYS50:B.NZ/1
DA22:D.N6/1 3.39 87:B/1 2.48 ASN51:B.OD1/1
DA22:D.N3/1 3.1 43:D/1 3.31 ARG5:B.NH2/1
DT23:D.O4/1 2.62 87:B/1 2.89 LYS50:B.NZ/1
DT23:D.O4/1 2.62 87:B/1 2.48 ASN51:B.OD1/1
DG27:D.OP1/1 2.58 64:D/1 3 LEU26:A.N/1
DG27:D.OP1/1 2.58 64:D/1 2.91 ARG53:A.NH1/1
DG27:D.OP2/1 2.95 99:A/1 2.73 LYS46:A.O/1
DG27:D.OP2/1 2.66 66:D/1 2.96 LYS46:A.NZ/1
DG27:D.OP2/1 2.95 99:A/1 3.14 ARG53:A.NH2/1
DG28:D.OP2/1 2.89 70:D/1 2.9 LYS50:A.O/1
DG29:D.N7/1 2.88 71:D/1 3.17 LYS50:A.NZ/1
DG29:D.N7/1 2.88 71:D/1 3.17 LYS50:A.NZ/1
DA30:D.OP2/1 2.88 74:D/1 3.03 LYS58:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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