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Nucleic atom dist Protein atom
DA1806:E.OP1/1 3.04 THR301:B.OG1/1
DA1806:E.OP2/1 3.05 LYS339:B.NZ/1
DA1807:E.OP2/1 2.87 GLY299:B.N/1
DG1808:E.OP1/1 3.3 ARG298:B.NH1/1
DG1808:E.OP2/1 2.84 SER297:B.N/1
DG1808:E.OP2/1 3.13 SER297:B.O/1
DT1811:E.OP1/1 2.84 GLY187:B.N/1
DT1811:E.OP1/1 2.84 THR190:B.N/1
DT1811:E.OP1/1 2.83 THR190:B.OG1/1
DT1811:E.OP2/1 3.08 ILE189:B.N/1
DT1812:E.OP1/1 2.92 GLY185:B.N/1
DA1904:F.OP1/1 2.91 GLY41:B.N/1
DT1905:F.OP1/1 3.33 ARG331:B.NE/1
DT1905:F.OP1/1 3.1 ARG331:B.NH2/1
DG1906:F.OP2/1 2.6 THR250:B.OG1/1
DG1906:F.OP2/1 2.7 ARG332:B.NH2/1
DG1906:F.O6/1 3.21 MET76:B.O/1
DG1906:F.O6/1 2.89 GLU79:B.OE2/1
DA1907:F.OP1/1 2.8 ILE248:B.N/1
DA1908:F.OP1/1 2.98 ARG242:B.NH2/1
DA1908:F.OP2/1 3 GLY246:B.N/1
DA1908:F.OP2/1 3.1 ARG336:B.NH1/1
DA1908:F.OP2/1 2.89 ARG336:B.NH2/1
DA1908:F.O5'/1 3.37 ARG336:B.NH1/1
DT1909:F.OP1/1 2.49 LYS243:B.N/1
DT1909:F.OP2/1 3.14 SER244:B.OG/1
DT1912:F.OP1/1 2.95 ALA220:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA1806:E.OP1/1 2.9 769:B/1 2.85 THR301:B.N/1
DA1806:E.OP2/1 2.88 727:B/1 2.77 HIS285:B.NE2/1
DA1807:E.OP1/1 2.75 612:B/1 2.83 GLY299:B.O/1
DA1807:E.OP1/1 2.75 612:B/1 2.63 LYS321:B.NZ/1
DA1810:E.OP1/1 2.62 714:B/1 2.54 LYS193:B.NZ/1
DT1812:E.OP1/1 2.66 21:E/1 3.05 ALA181:B.O/1
DT1812:E.OP1/1 2.66 21:E/1 2.99 VAL183:B.O/1
DT1812:E.OP1/1 2.66 21:E/1 2.79 ILE186:B.O/1
DA1813:E.O5'/1 3.01 756:B/1 2.54 ASP105:B.OD1/1
DA1904:F.OP2/1 3.07 650:B/1 2.61 SER34:B.OG/1
DT1905:F.OP1/1 3.13 650:B/1 2.61 SER34:B.OG/1
DG1906:F.O3'/1 2.65 649:B/1 2.49 LYS275:B.NZ/1
DT1912:F.OP1/1 2.92 619:B/1 2.9 ILE217:B.O/1
DT1912:F.OP1/1 3.13 640:B/1 2.79 GLU219:B.N/1
DT1912:F.OP1/1 2.92 619:B/1 2.89 LYS221:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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