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Nucleic atom dist Protein atom
DA7:D.OP2/1 2.89 THR301:A.N/1
DA7:D.OP2/1 2.73 THR301:A.OG1/1
DG8:D.OP2/1 2.86 GLY299:A.N/1
DG9:D.OP1/1 2.74 ARG298:A.NH1/1
DG9:D.OP2/1 3.13 SER297:A.N/1
DT11:D.OP1/1 3.17 LYS193:A.NZ/1
DT12:D.OP1/1 2.66 GLY187:A.N/1
DT12:D.OP1/1 3.24 THR190:A.N/1
DT12:D.OP1/1 2.73 THR190:A.OG1/1
DT12:D.OP2/1 3.05 ILE189:A.N/1
DA13:D.OP1/1 2.65 GLY185:A.N/1
DC103:E.O2/1 3.03 GLY41:A.O/1
DC103:E.N3/1 3.06 GLY58:A.O/1
DA104:E.OP1/1 2.69 ARG331:A.NH1/1
DT105:E.OP2/1 2.59 ARG332:A.NH1/1
DG106:E.OP2/1 2.74 LYS78:A.NZ/1
DG106:E.O6/1 3.05 MET76:A.O/1
DG106:E.O6/1 3.4 LYS78:A.N/1
DG106:E.N2/1 2.91 GLU79:A.OE2/1
DA107:E.OP1/1 3.07 ARG247:A.NH1/1
DA107:E.OP2/1 2.53 ILE248:A.N/1
DA108:E.OP1/1 3.33 LYS275:A.NZ/1
DA108:E.OP2/1 2.86 GLY246:A.N/1
DA108:E.OP2/1 2.75 ARG336:A.NH1/1
DA108:E.OP2/1 2.82 ARG336:A.NH2/1
DA108:E.O5'/1 2.71 ARG336:A.NH2/1
DT109:E.OP1/1 3.26 ARG242:A.NH1/1
DT109:E.OP1/1 3.06 LYS243:A.N/1
DT109:E.OP2/1 2.96 SER244:A.N/1
DT109:E.OP2/1 2.96 SER244:A.OG/1
DC111:E.OP1/1 3.19 LYS221:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA7:D.N7/1 2.65 23:D/1 2.89 LYS339:A.NZ/1
DG8:D.OP2/1 3 414:A/1 2.91 GLY299:A.O/1
DG8:D.OP2/1 3 414:A/1 2.89 LYS321:A.NZ/1
DT105:E.OP1/1 2.49 1117:E/1 3.32 ARG332:A.NH2/1
DG106:E.OP2/1 2.55 417:A/1 2.52 TYR12:A.OH/1
DG106:E.N7/1 2.8 430:A/1 2.63 MET76:A.O/1
DT109:E.OP2/1 2.55 1127:E/1 3.22 SER244:A.OG/1
DT112:E.OP1/1 2.52 1120:E/1 2.74 ILE217:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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