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Nucleic atom dist Protein atom
DT2:B.OP2/1 2.98 PHE268:A.N/1
DT3:B.O2/1 2.83 LYS139:A.NZ/1
DT3:B.O4/1 2.77 ARG271:A.NE/1
DC4:B.OP1/1 2.83 ASP173:A.N/1
DC4:B.O4'/1 2.96 LYS139:A.NZ/1
DC4:B.O2/1 3.12 LYS139:A.NZ/1
DG5:B.OP1/1 2.76 THR167:A.OG1/1
DG5:B.O6/1 3 HIS394:A.NE2/1
DA6:B.N7/1 3.17 TYR108:A.N/1
DA6:B.N6/1 2.99 ASN105:A.OD1/1
DA6:B.N6/1 2.85 PRO106:A.O/1
DT7:B.OP2/1 2.83 LYS200:A.N/1
DG8:B.O6/1 2.48 LYS200:A.NZ/1
DA12:C.N6/1 3.26 LYS200:A.NZ/1
DA14:C.OP2/1 2.81 LYS337:A.NZ/1
DC16:C.OP2/1 2.72 ARG353:A.NH2/1
DC16:C.O2/1 2.78 LYS116:A.NZ/1
DG17:C.OP2/1 2.63 SER272:A.OG/1
DG17:C.OP2/1 2.98 LYS276:A.NZ/1
DG17:C.O6/1 2.76 ARG271:A.NH2/1
DG17:C.N2/1 2.93 TYR117:A.OH/1
DA19:C.OP1/1 2.88 GLU113:A.N/1
DA19:C.O3'/1 3.11 LYS126:A.NZ/1
DC20:C.OP1/1 2.95 LYS126:A.NZ/1
DC20:C.OP1/1 2.76 LYS130:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT2:B.OP1/1 2.69 25:B/1 2.82 ILE266:A.O/1
DT2:B.OP1/1 2.57 59:B/1 2.97 ARG267:A.NH2/1
DT2:B.OP2/1 2.65 27:B/1 2.78 PHE268:A.O/1
DT2:B.OP2/1 2.82 13:B/1 2.86 ALA269:A.O/1
DT2:B.OP2/1 2.65 27:B/1 2.84 ARG323:A.NE/1
DT2:B.OP2/1 2.82 13:B/1 2.95 ARG323:A.NH2/1
DT2:B.O4/1 2.73 28:B/1 2.88 GLU274:A.OE2/1
DT3:B.OP2/1 2.76 23:B/1 2.82 LEU397:A.N/1
DC4:B.OP2/1 2.74 15:B/1 2.94 GLU172:A.N/1
DC4:B.O3'/1 3.1 14:B/1 2.88 ASN141:A.ND2/1
DG5:B.OP1/1 2.8 14:B/1 2.88 ASN141:A.ND2/1
DG5:B.OP2/1 2.7 22:B/1 3.04 HIS394:A.ND1/1
DG5:B.N2/1 3.02 3047:A/1 2.79 LYS116:A.O/1
DA6:B.OP2/1 2.74 16:B/1 2.84 ILE110:A.N/1
DA6:B.OP2/1 2.76 17:B/1 2.84 ASN141:A.ND2/1
DA6:B.O5'/1 2.86 3013:A/1 2.66 LYS200:A.O/1
DT7:B.OP1/1 2.62 47:B/1 2.65 LYS199:A.NZ/1
DT7:B.OP2/1 2.79 45:B/1 2.85 GLN198:A.O/1
DG8:B.N7/1 2.46 79:B/1 3.07 LYS200:A.NZ/1
DT9:B.O4/1 2.59 3284:A/1 2.4 LYS200:A.NZ/1
DC13:C.O2/1 2.75 3009:C/1 2.88 ARG296:A.NH2/1
DA14:C.OP1/1 2.79 3161:A/1 2.83 LEU298:A.O/1
DA14:C.OP1/1 2.79 3161:A/1 2.56 LYS299:A.NZ/1
DA14:C.N7/1 2.67 3061:C/1 2.94 LYS337:A.O/1
DC16:C.OP1/1 2.65 3004:C/1 2.93 ARG296:A.NH1/1
DC16:C.OP2/1 2.54 3035:C/1 2.91 HIS309:A.O/1
DC16:C.N4/1 2.9 3015:A/1 2.74 GLU354:A.OE1/1
DG17:C.N7/1 2.89 3027:A/1 3.17 ARG271:A.NH2/1
DG17:C.N7/1 2.89 3027:A/1 2.83 SER272:A.N/1
DG17:C.N7/1 2.89 3027:A/1 2.94 GLU354:A.OE2/1
DA19:C.OP1/1 2.84 3011:A/1 2.8 LYS126:A.NZ/1
DC20:C.OP1/1 2.89 3032:A/1 2.85 TRP136:A.NE1/1
DC20:C.OP1/1 2.89 3032:A/1 2.85 GLY138:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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