Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA3:E.O3'/1 2.8 ARG67:B.NH2/1
DT4:E.OP1/1 2.95 ARG67:B.NH1/1
DC6:E.OP1/1 3.31 TRP94:A.NE1/1
DA8:E.O3'/1 2.65 ARG75:A.NH2/1
DT21:F.O5'/1 2.78 LYS104:A.NZ/1
DA28:F.O4'/1 3.04 GLN69:A.NE2/1
DA28:F.O3'/1 3.36 ARG67:A.NH2/1
DA29:F.OP1/1 3.06 ARG67:A.NH1/1
DT31:F.OP1/1 2.68 TRP94:B.NE1/1
DC32:F.OP1/1 2.76 TRP85:B.N/1
DC32:F.OP2/1 3.26 ARG99:B.NH1/1
DC32:F.O3'/1 2.61 ASN127:B.OD1/1
DC32:F.O2/1 2.9 ARG72:B.NH2/1
DA3:G.O3'/1 2.91 ARG67:C.NH2/1
DT4:G.OP1/1 3.1 ARG67:C.NH1/1
DC6:G.OP1/1 3.27 TRP85:D.NE1/1
DC6:G.OP1/1 3.28 TRP94:D.NE1/1
DA8:G.O3'/1 2.48 ARG75:D.NH2/1
DT21:H.OP1/1 2.68 LYS104:D.NZ/1
DA28:H.O5'/1 2.49 GLN69:D.NE2/1
DA28:H.O3'/1 3.3 ARG67:D.NH2/1
DA29:H.OP1/1 3.05 ARG67:D.NH1/1
DT31:H.OP1/1 2.69 TRP94:C.NE1/1
DC32:H.OP1/1 2.85 TRP85:C.N/1
DC32:H.O3'/1 2.21 ASN127:C.OD1/1
DC32:H.O2/1 2.83 ARG72:C.NH2/1
DA2:I.OP1/1 3.09 LYS28:C.NZ/1
DA2:I.OP2/1 3.05 LYS28:C.NZ/1
DT4:I.OP1/1 3.05 LYS54:C.NZ/1
DT4:I.OP2/1 3.05 LYS54:C.NZ/1
DA8:I.OP1/1 2.99 LYS33:B.NZ/1
DT9:I.OP2/1 3.03 GLN29:B.NE2/1
DC10:I.OP2/1 3.25 SER23:B.OG/1
DA18:J.OP1/1 3.05 LYS28:B.NZ/1
DA18:J.OP2/1 2.89 LYS28:B.NZ/1
DT20:J.OP2/1 3.02 LYS54:B.NZ/1
DA24:J.OP1/1 2.8 LYS33:C.NZ/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC32:F.OP1/1 2.81 2007:B/1 2.22 ALA84:B.N/1
DC32:F.O3'/1 2.73 2006:B/1 2.14 GLU79:B.OE1/1
DC32:F.O3'/1 2.73 2006:B/1 3.23 ASN127:B.O/1
DC32:F.O3'/1 2.73 2006:B/1 2.71 ASN127:B.OD1/1
DC32:F.O2/1 2.75 2005:B/1 2.02 ARG72:B.NH2/1
DA28:H.OP1/1 3.24 2010:D/1 2.24 LYS68:D.O/1
DC32:H.O3'/1 2.6 2004:C/1 2.14 GLU79:C.OE1/1
DC32:H.O3'/1 2.6 2004:C/1 3.05 ASN127:C.O/1
DC32:H.O3'/1 2.6 2004:C/1 2.38 ASN127:C.OD1/1
DA2:I.OP1/1 2.08 2001:I/1 2.92 TRP78:C.N/1
DA18:J.OP1/1 2.2 2001:J/1 2.77 TRP78:B.N/1
DA24:J.OP2/1 2.95 2002:C/1 2.46 LYS53:C.NZ/1

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

text