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Nucleic atom dist Protein atom
C11:T.OP1/1 2.3 ASP561:D.OD2/1
U12:T.OP1/1 2.68 ARG689:B.NH2/1
G24:T.OP1/1 3.08 ARG757:B.NH2/1
G24:T.O2'/1 2.91 LEU756:B.O/1
C25:T.OP1/1 2.74 ARG757:B.NH1/1
C25:T.OP1/1 3.28 ASP758:B.N/1
A26:T.OP1/1 2.92 PHE694:B.N/1
A26:T.OP1/1 2.65 PHE694:B.O/1
A26:T.OP1/1 2.86 ARG695:B.NH1/1
U33:T.O2'/1 3.13 ARG780:B.NH2/1
G34:T.N7/1 2.84 ARG780:B.NH1/1
A35:T.N6/1 3.07 ARG780:B.NH1/1
A36:T.O2'/1 2.51 ASP696:B.OD2/1
A37:T.O2'/1 2.69 ASP696:B.O/1
C42:T.O2'/1 2.72 TYR25:A.OH/1
C56:T.O2'/1 2.84 GLN34:A.NE2/1
U68:T.OP1/1 3.18 GLN207:C.OE1/1
C69:T.OP1/1 2.73 GLN207:C.OE1/1
C74:T.OP1/1 2.43 ARG353:D.NE/1
C74:T.OP1/1 2.57 ARG353:D.NH2/1
C75:T.N4/1 2.6 ASP33:D.OD1/1
A76:T.OP1/1 2.82 ASP147:C.O/1
A76:T.O3'/1 2.74 ARG204:C.NH1/1
A76:T.O2'/1 2.87 GLU206:C.OE2/1
A76:T.N7/1 3.34 ARG321:C.NH1/1
C11:E.OP1/1 2.3 ASP561:B.OD2/1
U12:E.OP1/1 2.68 ARG689:D.NH2/1
G24:E.OP1/1 3.08 ARG757:D.NH2/1
G24:E.O2'/1 2.91 LEU756:D.O/1
C25:E.OP1/1 2.74 ARG757:D.NH1/1
C25:E.OP1/1 3.28 ASP758:D.N/1
A26:E.OP1/1 2.92 PHE694:D.N/1
A26:E.OP1/1 2.65 PHE694:D.O/1
A26:E.OP1/1 2.86 ARG695:D.NH1/1
U33:E.O2'/1 3.13 ARG780:D.NH2/1
G34:E.N7/1 2.84 ARG780:D.NH1/1
A35:E.N6/1 3.07 ARG780:D.NH1/1
A36:E.O2'/1 2.5 ASP696:D.OD2/1
A37:E.O2'/1 2.69 ASP696:D.O/1
C42:E.O2'/1 2.72 TYR25:C.OH/1
C56:E.O2'/1 2.84 GLN34:C.NE2/1
U68:E.OP1/1 3.18 GLN207:A.OE1/1
C69:E.OP1/1 2.73 GLN207:A.OE1/1
C74:E.OP1/1 2.43 ARG353:B.NE/1
C74:E.OP1/1 2.57 ARG353:B.NH2/1
C75:E.N4/1 2.6 ASP33:B.OD1/1
A76:E.OP1/1 2.82 ASP147:A.O/1
A76:E.O3'/1 2.74 ARG204:A.NH1/1
A76:E.O2'/1 2.87 GLU206:A.OE2/1
A76:E.N7/1 3.34 ARG321:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
C67:T.O4'/1 2.69 2029:T/1 2.81 GLU540:D.OE1/1
C67:T.O4'/1 2.69 2029:T/1 2.96 GLU540:D.OE2/1
U68:T.OP1/1 2.97 2025:C/1 2.89 GLN207:C.NE2/1
C67:E.O4'/1 2.69 2029:E/1 2.81 GLU540:B.OE1/1
C67:E.O4'/1 2.69 2029:E/1 2.96 GLU540:B.OE2/1
U68:E.OP1/1 2.97 2025:A/1 2.89 GLN207:A.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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