Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA6:P.OP2/1 3.41 LYS342:A.NZ/1
DA7:P.OP1/1 3.32 THR304:A.N/1
DA7:P.OP2/1 2.51 THR304:A.OG1/1
DG8:P.OP2/1 2.78 GLY302:A.N/1
DG9:P.OP2/1 3.05 SER300:A.N/1
DT12:P.OP1/1 2.88 GLY190:A.N/1
DT12:P.OP1/1 2.78 THR193:A.N/1
DT12:P.OP1/1 2.63 THR193:A.OG1/1
DT12:P.OP2/1 3.42 ILE192:A.N/1
DC13:P.OP1/1 2.59 GLY188:A.N/1
DC13:P.OP1/1 3.23 ILE189:A.N/1
DT14:P.OP2/1 2.59 LYS155:A.NZ/1
DT14:P.O3'/1 3.09 SER106:A.OG/1
DT14:P.O3'/1 2.04 ASP108:A.OD1/1
DT14:P.O3'/1 3.22 SER106:A.OG/1
DT14:P.O3'/1 2.61 ASP108:A.OD1/1
DC4:T.OP1/1 3.04 ARG334:A.NE/1
DC4:T.OP1/1 2.79 ARG334:A.NH2/1
DC4:T.OP2/1 2.63 ARG335:A.NH1/1
DC4:T.O3'/1 3.17 THR253:A.OG1/1
DG6:T.OP2/1 2.62 ARG250:A.NH1/1
DG6:T.OP2/1 3.18 ILE251:A.N/1
DA7:T.OP1/1 2.83 ARG245:A.NH2/1
DA7:T.OP2/1 2.8 GLY249:A.N/1
DA7:T.OP2/1 3.28 GLY249:A.O/1
DA7:T.OP2/1 3 ARG339:A.NH1/1
DA7:T.OP2/1 3.21 ARG339:A.NH2/1
DA8:T.OP1/1 2.95 LYS246:A.N/1
DT9:T.OP2/1 2.79 LYS246:A.NZ/1
DC11:T.OP1/1 2.55 ALA223:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG8:P.OP1/1 2.84 2010:P/1 2.98 GLY302:A.O/1
DC13:P.OP1/1 2.59 2018:P/1 2.79 VAL186:A.O/1
DT14:P.OP1/1 2.49 2022:P/1 3.14 ASP10:A.OD1/1
DT14:P.OP1/1 2.49 2022:P/1 3.18 LYS162:A.NZ/1
DA3:T.OP1/1 2.86 2009:T/1 2.85 ARG335:A.NH1/1
DA3:T.OP1/1 2.86 2009:T/1 2.65 ARG335:A.NH2/1
DA3:T.O3'/1 2.5 2007:T/1 2.49 SER37:A.OG/1
DA3:T.N3/1 3.01 2022:A/1 2.9 GLY44:A.N/1
DC4:T.OP1/1 2.63 2008:T/1 2.7 THR253:A.OG1/1
DC4:T.OP1/1 2.63 2008:T/1 3.03 ARG334:A.NE/1
DC4:T.OP1/1 2.63 2008:T/1 3.13 ARG335:A.NH1/1
DG6:T.OP1/1 3.03 2079:A/1 2.96 GLY249:A.O/1
DG6:T.OP1/1 3.03 2079:A/1 2.57 LYS278:A.NZ/1
DA8:T.OP1/1 2.75 2015:T/1 2.82 ARG245:A.NH1/1
DC11:T.OP1/1 2.53 2019:T/1 2.98 ILE220:A.O/1
DC11:T.OP1/1 2.53 2019:T/1 3.05 LYS224:A.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text