Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA1005:B.OP1/1 3.23 ARG455:A.NE/1
DA1005:B.OP2/1 2.47 ARG455:A.NH2/1
DA1005:B.N3/1 2.96 ASN420:A.ND2/1
DG1007:B.OP2/1 2.52 TYR497:A.OH/1
DG1007:B.O3'/1 2.71 GLU357:A.OE1/1
DG1007:B.O3'/1 3.01 THR358:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DA1005:B.OP1/1 2.73 189:B/1 2.94 HIS456:A.N/1
DG1007:B.OP2/1 3.03 168:A/1 2.95 ASP501:A.OD1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text