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Nucleic atom dist Protein atom
DC2:X.OP1/1 3.01 SER485:N.OG/1
DC3:X.OP1/1 3.25 ARG486:N.NH2/1
DC11:X.OP1/1 2.79 ARG586:N.NH2/1
DG12:X.OP1/1 2.67 GLN1441:N.O/1
DG12:X.O3'/1 2.63 TYR1093:N.OH/1
DT13:X.OP1/1 2.84 TYR1093:N.OH/1
DT13:X.OP1/1 2.56 ARG1096:N.NH2/1
DT14:X.OP1/1 2.93 LYS610:N.NZ/1
DG16:X.OP1/1 2.94 ARG1031:M.NH1/1
DG16:X.OP1/1 2.8 LYS621:N.NZ/1
DG16:X.OP2/1 3 ARG1031:M.NH1/1
DC17:X.OP1/1 3.06 ARG1031:M.N/1
DC17:X.OP2/1 3.43 ARG622:N.NH2/1
DC17:X.O3'/1 2.82 ARG628:N.NE/1
DC17:X.O3'/1 2.51 ARG628:N.NH2/1
DG23:X.OP2/1 2.67 ARG534:N.NH2/1
A2:Y.OP2/1 1.82 LYS671:N.NZ/1
U6:Y.O4/1 2.81 TYR1013:M.O/1
G7:Y.O6/1 2.49 LEU1015:M.N/1
G10:Y.OP1/1 2.89 GLN611:N.NE2/1
G10:Y.OP2/1 3.06 GLN611:N.NE2/1
C11:Y.O3'/1 3.25 GLN390:M.NE2/1
C13:Y.OP1/1 2.97 ASN448:M.ND2/1
C13:Y.OP2/1 2.81 ASN448:M.ND2/1
C13:Y.O3'/1 2.97 ARG409:M.NH2/1
G14:Y.OP1/1 2.95 ARG409:M.NH1/1
G14:Y.O3'/1 3.28 GLN567:M.NE2/1
G16:Y.OP1/1 3.36 LYS846:M.NZ/1
G16:Y.O3'/1 3.29 ARG704:N.NH2/1
G16:Y.O3'/1 2.63 ASP743:N.OD1/1
G16:Y.O2'/1 2.53 ARG704:N.NH2/1
DA3:Z.N3/1 3.12 ARG422:M.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT14:X.OP1/1 2.85 2046:X/1 3.11 ARG1096:N.NH1/1
DT14:X.O5'/1 3.12 2046:X/1 3.11 ARG1096:N.NH1/1
DC15:X.O3'/1 2.47 927:X/1 3.17 GLU1036:M.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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