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Nucleic atom dist Protein atom
DG5:P.OP1/1 2.78 ARG454:B.NH2/1
DG5:P.OP2/1 3.39 ARG454:B.NH1/1
DA6:P.OP1/1 2.74 THR473:B.N/1
DA7:P.OP2/1 3.24 ALA471:B.N/1
DG8:P.OP2/1 3.37 THR469:B.N/1
DC11:P.OP1/1 3.09 GLY358:B.N/1
DC11:P.OP1/1 2.96 VAL360:B.N/1
DC11:P.OP1/1 2.67 THR361:B.N/1
DC12:P.OP1/1 3.43 GLY356:B.N/1
DC12:P.OP1/1 2.8 ILE357:B.O/1
DC4:T.N4/1 2.75 THR44:B.OG1/1
DA5:T.OP1/1 2.65 ARG507:B.NH1/1
DG6:T.OP1/1 2.62 THR421:B.N/1
DG6:T.OP2/1 2.89 THR421:B.OG1/1
DG7:T.OP2/1 2.97 GLU419:B.N/1
DG8:T.OP1/1 2.98 ARG413:B.NH1/1
DG8:T.OP2/1 2.72 SER417:B.N/1
DT9:T.OP1/1 2.71 LYS414:B.N/1
DT9:T.OP2/1 2.61 SER415:B.OG/1
DT12:T.OP1/1 2.97 THR390:B.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC12:P.OP1/1 2.53 875:B/1 2.4 VAL354:B.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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