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Nucleic atom dist Protein atom
DT1:D.O5'/1 2.59 GLY91:L.O/1
DT1:D.O4/1 2.8 ASN35:H.ND2/1
DC2:D.OP2/1 2.71 HIS27:L.NE2/1
DC2:D.O2/1 2.66 GLY98:H.N/1
DC2:D.N4/1 2.69 GLY91:L.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC2:D.OP2/1 2.54 28:D/1 2.65 SER92:L.O/1
DC2:D.O2/1 2.91 224:L/1 2.54 TYR32:L.OH/1
DC2:D.N3/1 2.81 229:H/1 2.62 SER99:H.O/1
DC2:D.N4/1 3.13 221:L/1 2.67 GLU34:L.OE2/1
DC2:D.N4/1 3.13 221:L/1 3.11 TRP95:H.NE1/1
DC2:D.N4/1 3.13 221:L/1 3 SER99:H.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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