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Nucleic atom dist Protein atom
DT408:E.OP1/1 2.89 ARG90:B.NH1/1
DT408:E.OP1/1 2.66 ARG90:B.NH2/1
DT408:E.O3'/1 3.04 SER104:B.OG/1
DC409:E.OP1/1 3.13 VAL88:B.N/1
DA426:F.OP1/1 2.58 LYS246:B.NZ/1
DG428:F.OP2/1 2.87 ASN168:B.N/1
DG428:F.OP2/1 2.39 ARG252:B.NH2/1
DG428:F.O5'/1 2.81 ARG252:B.NH2/1
DA429:F.OP1/1 3 HIS67:B.NE2/1
DA429:F.OP2/1 2.65 LYS52:B.NZ/1
DA430:F.OP2/1 2.71 ARG124:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA429:F.OP1/1 2.79 1003:B/1 2.39 LYS52:B.N/1
DA429:F.OP1/1 2.79 1003:B/1 2.56 GLN160:B.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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