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Nucleic atom dist Protein atom
DG3:T.OP1/1 3.12 HIS541:A.ND1/1
DC4:T.OP1/1 2.45 LYS521:A.NZ/1
DA5:T.OP1/1 2.99 ARG514:A.NH2/1
DA5:T.OP2/1 2.78 ARG514:A.NE/1
DA5:T.N3/1 3.29 ARG517:A.NH1/1
DG6:T.OP2/1 2.65 LYS521:A.NZ/1
DG6:T.N2/1 2.99 GLU529:A.OE2/1
DA8:T.OP1/1 3.04 GLN471:A.NE2/1
DA8:T.OP1/1 2.82 HIS530:A.NE2/1
DC9:T.OP1/1 3.06 GLN471:A.N/1
DC9:T.OP1/1 3.23 LYS472:A.N/1
DT10:T.OP1/1 3.03 SER463:A.N/1
DT4:P.OP1/1 2.74 GLY345:A.N/1
DT4:P.OP1/1 2.95 THR348:A.N/1
DT4:P.OP1/1 2.64 THR348:A.OG1/1
DT4:P.OP2/1 3.05 LYS347:A.N/1
DA5:P.OP1/1 2.8 GLY343:A.N/1
DC6:P.OP1/1 3.1 TRP342:A.NE1/1
DC6:P.OP1/1 3.04 ARG488:A.NH2/1
DC6:P.O3'/1 3.22 ASP429:A.OD1/1
DC6:P.O3'/1 2.61 ASP490:A.OD2/1
DC6:P.O2/1 2.6 TYR505:A.OH/1
DG1:D.OP1/1 2.94 TYR267:A.OH/1
DG1:D.OP1/1 2.9 TYR279:A.OH/1
DG1:D.OP2/1 2.6 ARG275:A.NH1/1
DC2:D.OP1/1 2.88 GLY306:A.N/1
DC2:D.OP1/1 2.85 MET309:A.N/1
DC3:D.OP1/1 2.61 GLY304:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC4:T.O2/1 2.69 147:T/1 2.8 LYS281:A.NZ/1
DG6:T.OP1/1 2.91 2815:A/1 2.82 ARG517:A.O/1
DG6:T.OP1/1 2.96 271:T/1 3.03 SER526:A.OG/1
DG6:T.OP1/1 2.91 2815:A/1 2.85 LEU527:A.N/1
DT7:T.OP1/1 2.85 2896:A/1 2.68 SER526:A.OG/1
DT7:T.OP1/1 2.63 33:T/1 2.73 SER528:A.OG/1
DT7:T.OP1/1 2.85 2896:A/1 2.99 LYS544:A.NZ/1
DA8:T.N3/1 2.84 43:T/1 2.95 LYS472:A.NZ/1
DC9:T.OP1/1 2.79 2824:A/1 3.15 GLN464:A.N/1
DC9:T.OP1/1 2.79 2824:A/1 2.62 LYS472:A.O/1
DC9:T.OP2/1 2.54 77:T/1 2.82 GLN469:A.O/1
DC9:T.OP2/1 2.54 77:T/1 3.18 GLN471:A.NE2/1
DC9:T.O4'/1 2.95 43:T/1 2.95 LYS472:A.NZ/1
DC9:T.O2/1 2.77 40:T/1 3.08 GLN372:A.NE2/1
DT10:T.OP2/1 2.69 117:T/1 3.03 GLU466:A.OE1/1
DT10:T.OP2/1 2.69 117:T/1 3.01 GLU466:A.OE2/1
DT10:T.O4'/1 2.95 40:T/1 3.08 GLN372:A.NE2/1
DG11:T.OP1/1 3.07 2814:A/1 2.9 THR371:A.N/1
DG11:T.OP1/1 2.87 2893:A/1 2.79 THR371:A.OG1/1
DG11:T.OP1/1 3.19 2834:A/1 3.05 GLN372:A.N/1
DG3:P.OP1/1 2.65 140:P/1 3.11 LYS347:A.NZ/1
DA5:P.OP2/1 2.69 80:P/1 3.06 SER339:A.O/1
DA5:P.N3/1 2.67 20:P/1 3.07 LYS472:A.NZ/1
DC6:P.OP1/1 2.98 2807:A/1 2.92 ASP427:A.OD1/1
DC6:P.OP1/1 2.81 220:P/1 2.88 ARG488:A.NE/1
DC6:P.O4'/1 3 20:P/1 3.07 LYS472:A.NZ/1
DC6:P.O2/1 3.16 2818:A/1 2.68 LYS472:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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