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Nucleic atom dist Protein atom
DG3:T.OP1/1 2.89 HIS541:A.ND1/1
DC4:T.OP1/1 2.51 LYS521:A.NZ/1
DG5:T.OP1/1 3.09 ARG514:A.NH2/1
DG5:T.OP2/1 2.78 ARG514:A.NE/1
DG6:T.OP2/1 2.7 LYS521:A.NZ/1
DG6:T.N2/1 2.83 GLU529:A.OE2/1
DT7:T.OP2/1 3.47 LYS544:A.NZ/1
DA8:T.OP1/1 2.8 GLN471:A.NE2/1
DA8:T.OP1/1 2.72 HIS530:A.NE2/1
DC9:T.OP1/1 2.97 GLN471:A.N/1
DC9:T.OP1/1 3.25 LYS472:A.N/1
DT10:T.OP1/1 2.98 SER463:A.N/1
DT4:P.OP1/1 2.79 GLY345:A.N/1
DT4:P.OP1/1 2.84 THR348:A.N/1
DT4:P.OP1/1 2.78 THR348:A.OG1/1
DT4:P.OP2/1 3.09 LYS347:A.N/1
DA5:P.OP1/1 2.79 GLY343:A.N/1
DC6:P.OP1/1 3.09 TRP342:A.NE1/1
DC6:P.OP1/1 2.8 ARG488:A.NH2/1
DC6:P.O3'/1 2.65 ASP490:A.OD1/1
DC6:P.O2/1 2.65 TYR505:A.OH/1
DG1:D.OP1/1 3.04 TYR267:A.OH/1
DG1:D.OP1/1 2.55 TYR279:A.OH/1
DG1:D.OP2/1 2.89 ARG275:A.NH1/1
DG1:D.OP2/1 2.63 ARG308:A.NH2/1
DC2:D.OP1/1 2.92 GLY306:A.N/1
DC2:D.OP1/1 2.76 MET309:A.N/1
DC3:D.OP1/1 2.56 GLY304:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:T.OP1/1 2.62 16:T/1 2.84 ARG517:A.O/1
DG6:T.OP1/1 2.62 16:T/1 3.17 LEU527:A.N/1
DG6:T.OP2/1 3.05 817:A/1 2.93 ARG538:A.NE/1
DT7:T.OP1/1 2.44 38:T/1 2.74 SER526:A.OG/1
DT7:T.OP1/1 2.61 21:T/1 2.61 SER528:A.OG/1
DT7:T.O5'/1 3.05 21:T/1 2.61 SER528:A.OG/1
DA8:T.O4'/1 3.19 14:T/1 2.79 LYS472:A.NZ/1
DC9:T.OP1/1 2.7 24:T/1 3.31 GLN464:A.N/1
DC9:T.OP1/1 2.7 24:T/1 2.76 LYS472:A.O/1
DC9:T.OP2/1 2.77 853:A/1 2.6 GLN464:A.OE1/1
DC9:T.OP2/1 2.49 17:T/1 2.59 GLN469:A.O/1
DC9:T.OP2/1 2.49 17:T/1 3.36 GLN471:A.NE2/1
DC9:T.O2/1 2.82 28:T/1 2.97 GLN372:A.NE2/1
DT10:T.OP2/1 2.68 766:A/1 3.3 SER463:A.O/1
DT10:T.OP2/1 2.68 766:A/1 2.61 GLU466:A.OE1/1
DT10:T.O4'/1 2.97 28:T/1 2.97 GLN372:A.NE2/1
DG11:T.OP1/1 2.92 19:T/1 3.15 THR371:A.N/1
DG11:T.OP1/1 2.97 18:T/1 3.13 GLN372:A.N/1
DA5:P.OP2/1 2.62 30:P/1 3.05 SER339:A.O/1
DA5:P.N3/1 2.72 8:P/1 2.82 LYS472:A.NZ/1
DC6:P.OP1/1 2.85 33:P/1 2.99 ARG488:A.NE/1
DC6:P.O4'/1 2.96 8:P/1 2.82 LYS472:A.NZ/1
DC6:P.O3'/1 2.89 21:P/1 3.4 LYS472:A.NZ/1
DC6:P.O2/1 3.23 14:T/1 2.79 LYS472:A.NZ/1
DC3:D.OP2/1 3 788:A/1 2.91 CYS300:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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