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Nucleic atom dist Protein atom
DC1:G.OP1/1 2.9 ARG488:D.NH1/1
DC2:G.OP1/1 3.47 ARG488:D.NH2/1
DC3:G.OP1/1 3.48 ARG486:D.NE/1
DC3:G.OP1/1 3.34 ARG486:D.NH2/1
DC11:G.OP1/1 2.83 ARG586:D.NH2/1
DC11:G.OP1/1 2.73 ASN1442:D.ND2/1
DG12:G.OP1/1 2.92 PHE1440:D.O/1
DG12:G.OP1/1 2.17 GLN1441:D.O/1
DG12:G.O3'/1 2.67 TYR1093:D.OH/1
DT13:G.OP1/1 2.58 ARG1096:D.NH2/1
DT13:G.OP2/1 2.86 ARG1096:D.NH2/1
DT14:G.OP1/1 3.2 ARG422:C.NH2/1
DG16:G.OP2/1 3.16 LYS621:D.NZ/1
DC17:G.OP1/1 2.88 ARG1031:C.N/1
DC17:G.OP2/1 3.35 ARG622:D.NH2/1
DC21:G.O3'/1 2.85 ARG134:C.NH2/1
DG23:G.OP1/1 2.69 ARG388:C.NH1/1
DG23:G.OP2/1 2.93 ARG534:D.NH2/1
DG23:G.O5'/1 2.75 ARG534:D.NH2/1
G1:H.N2/1 2.67 GLU770:C.OE1/1
A2:H.O4'/1 3.13 LYS671:D.NZ/1
U4:H.O2'/1 2.55 GLU764:C.OE2/1
G7:H.O6/1 3.08 LEU1015:C.N/1
G10:H.OP1/1 2.75 GLN611:D.OE1/1
G10:H.OP2/1 3 GLN611:D.NE2/1
C11:H.O3'/1 2.66 GLN390:C.NE2/1
G12:H.OP1/1 3.18 GLN390:C.NE2/1
C13:H.OP2/1 2.88 ASN448:C.ND2/1
C13:H.O3'/1 2.64 ARG409:C.NH2/1
G14:H.OP1/1 2.89 ARG409:C.NH1/1
G14:H.O3'/1 2.75 GLN567:C.NE2/1
C15:H.O3'/1 2.66 LYS846:C.NZ/1
G16:H.O3'/1 3.08 ASP743:D.OD1/1
G16:H.O3'/1 3.12 ASP743:D.OD2/1
G16:H.O2'/1 2.5 ARG704:D.NH2/1
G16:H.O2'/1 2.63 ASP743:D.OD1/1
DC6:I.OP1/1 2.37 ARG1266:D.NH1/1
DC6:I.OP1/1 2.78 ARG1266:D.NH2/1
DA8:I.OP1/1 2.67 LYS1426:D.NZ/1
DG9:I.OP1/1 3.39 LYS494:D.NZ/1
DA10:I.OP2/1 2.67 LYS494:D.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
G1:H.N2/1 2.73 9479:D/1 2.53 ARG65:D.NH1/1
G7:H.O2'/1 2.67 2420:H/1 2.97 GLY1022:C.O/1
C15:H.OP2/1 2.48 1177:H/1 3.2 GLU445:C.N/1
C15:H.OP2/1 2.48 1177:H/1 3.1 GLU445:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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