Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA3:E.OP1/1 2.63 SER192:B.OG/1
DA3:E.N7/1 2.85 LYS422:B.NZ/1
DC4:E.OP2/1 2.63 THR189:B.OG1/1
DC4:E.OP2/1 2.79 LYS392:B.NZ/1
DC4:E.O5'/1 3.17 LYS392:B.NZ/1
DT5:E.OP1/1 2.74 ASN396:B.N/1
DT6:E.OP1/1 3 ARG223:B.NH1/1
DT6:E.OP1/1 2.91 ASN396:B.OD1/1
DT5:L.O2/1 2.99 ASN62:B.ND2/1
DT6:L.OP1/1 3.06 VAL130:B.N/1
DT6:L.O4'/1 3.02 ASN62:B.ND2/1
DT7:L.O3'/1 2.72 GLU14:B.OE1/1
DT7:L.O3'/1 2.97 THR15:B.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG1:E.O5'/1 2.89 9517:B/1 2.64 GLU420:B.OE2/1
DG2:E.OP1/1 2.55 1218:E/1 3.06 LYS422:B.NZ/1
DG2:E.O6/1 3.08 9087:B/1 2.89 ASN91:B.ND2/1
DG2:E.O6/1 2.65 1170:E/1 2.95 ASN91:B.ND2/1
DG2:E.O6/1 3.08 9087:B/1 2.7 ASP104:B.OD1/1
DG2:E.N2/1 3.11 9327:B/1 2.9 ASP104:B.OD1/1
DG2:E.N2/1 2.77 1834:E/1 3.27 TYR120:B.OH/1
DA3:E.OP1/1 2.73 245:E/1 2.86 MET188:B.N/1
DA3:E.OP2/1 2.72 324:E/1 2.84 LYS392:B.NZ/1
DA3:E.OP2/1 2.43 1324:E/1 3.25 LYS392:B.NZ/1
DA3:E.OP2/1 2.43 1324:E/1 3.25 LYS422:B.NZ/1
DA3:E.N6/1 3.23 9517:B/1 2.64 GLU420:B.OE2/1
DC4:E.OP1/1 2.7 93:E/1 2.73 TYR101:B.OH/1
DC4:E.OP1/1 2.79 2421:E/1 2.92 GLY191:B.N/1
DT5:E.OP1/1 2.5 1041:E/1 2.76 ASN396:B.O/1
DT5:E.OP1/1 2.5 1041:E/1 3.21 ASP398:B.O/1
DT5:E.OP2/1 2.76 1992:E/1 2.83 TYR101:B.OH/1
DT5:E.O4'/1 2.95 9043:B/1 2.73 TYR226:B.OH/1
DT5:E.O4'/1 2.95 9043:B/1 2.71 GLY391:B.O/1
DC4:L.OP1/1 2.22 999:L/1 2.75 GLY532:B.N/1
DC4:L.O3'/1 3.2 9383:B/1 2.69 PRO127:B.O/1
DT5:L.OP1/1 2.76 9383:B/1 2.69 PRO127:B.O/1
DT5:L.O4/1 2.65 9276:B/1 2.64 PRO556:B.O/1
DT6:L.OP1/1 2.87 9232:B/1 2.75 LYS143:B.NZ/1
DT7:L.OP1/1 2.29 2468:L/1 3.08 PHE13:B.O/1
DT7:L.OP1/1 2.5 2433:L/1 2.72 GLU14:B.OE1/1
DT7:L.OP1/1 2.5 2433:L/1 2.51 TYR165:B.OH/1
DT7:L.OP2/1 2.3 2467:L/1 2.64 TYR148:B.OH/1
DT7:L.O3'/1 3 9354:B/1 2.99 THR15:B.O/1
DT7:L.O3'/1 3 9354:B/1 3.04 TRP25:B.NE1/1
DT7:L.O3'/1 3 9354:B/1 2.9 TYR148:B.O/1
DT7:L.O2/1 2.76 178:L/1 2.76 LEU567:B.N/1
DT7:L.N3/1 3.15 9303:B/1 2.66 LEU567:B.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text