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Nucleic atom dist Protein atom
DT7:X.OP2/1 2.98 LYS64:A.NZ/1
DA9:X.O4'/1 2.77 GLY532:A.N/1
DC10:X.OP1/1 3.12 CYS530:A.N/1
DC10:X.OP1/1 2.49 LYS538:A.NZ/1
DC10:X.O2/1 2.83 LYS498:A.NZ/1
2DA11:X.OP1/1 2.72 TYR500:A.OH/1
DC5:Y.OP1/1 2.79 SER192:A.OG/1
DA6:Y.OP2/1 2.93 THR189:A.OG1/1
DA6:Y.OP2/1 2.86 LYS392:A.NZ/1
DT7:Y.OP1/1 3.19 ASN396:A.N/1
DT9:Y.OP1/1 3.02 GLY228:A.N/1
DA10:Y.OP1/1 2.94 GLN303:A.OE1/1
DA10:Y.OP1/1 2.96 GLN497:A.OE1/1
DA10:Y.OP2/1 2.69 LYS305:A.NZ/1
DA11:Y.OP2/1 3.33 ASN313:A.ND2/1
DA11:Y.O3'/1 2.93 ARG496:A.NH2/1
DG12:Y.OP1/1 2.86 ARG496:A.NH1/1
DG12:Y.OP1/1 3 ARG496:A.NH2/1
DG12:Y.OP1/1 2.76 LYS575:A.N/1
DC13:Y.OP1/1 3.24 THR571:A.OG1/1
DC13:Y.OP1/1 2.53 THR573:A.OG1/1
DC13:Y.OP2/1 2.99 LYS575:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA9:X.OP1/1 2.58 375:X/1 3.05 ASP535:A.N/1
DC10:X.O3'/1 3.16 3212:A/1 2.52 TYR454:A.OH/1
DC10:X.O3'/1 3.16 3212:A/1 2.57 ASP456:A.OD2/1
2DA11:X.OP1/1 2.66 3212:A/1 2.52 TYR454:A.OH/1
2DA11:X.OP1/1 2.66 3212:A/1 2.57 ASP456:A.OD2/1
2DA11:X.OP1/1 2.96 3403:A/1 2.49 SER459:A.OG/1
2DA11:X.OP1/1 2.96 3403:A/1 2.89 HIS461:A.NE2/1
DA4:Y.N6/1 3.03 3465:A/1 2.74 ASP104:A.OD1/1
DC5:Y.OP1/1 3.03 3424:A/1 2.99 MET188:A.N/1
DC5:Y.OP2/1 2.94 3261:A/1 2.75 LYS392:A.NZ/1
DA6:Y.OP1/1 2.42 56:Y/1 2.49 TYR101:A.OH/1
DT7:Y.OP1/1 3 3425:A/1 2.7 ASN396:A.O/1
DT7:Y.O2/1 2.59 126:Y/1 2.65 TYR390:A.OH/1
DG8:Y.OP1/1 2.6 335:Y/1 2.84 ARG223:A.NH1/1
DG8:Y.OP1/1 2.52 334:Y/1 2.84 ASN396:A.OD1/1
DG8:Y.O4'/1 2.99 126:Y/1 2.65 TYR390:A.OH/1
DG8:Y.N2/1 3.1 371:Y/1 2.94 GLY229:A.N/1
DG8:Y.N2/1 2.91 3412:A/1 2.72 LYS498:A.NZ/1
DG8:Y.N3/1 2.68 371:Y/1 2.94 GLY229:A.N/1
DT9:Y.OP1/1 2.63 3221:A/1 2.6 GLN303:A.NE2/1
DA10:Y.OP1/1 3.04 3237:A/1 2.81 GLY229:A.O/1
DA10:Y.OP1/1 3.04 3237:A/1 3.03 THR231:A.N/1
DA10:Y.OP1/1 3.04 3237:A/1 2.58 TYR315:A.OH/1
DA11:Y.OP1/1 2.59 281:Y/1 3.28 GLN497:A.N/1
DA11:Y.OP1/1 2.59 281:Y/1 2.76 GLN497:A.NE2/1
DG12:Y.N3/1 2.75 117:Y/1 3.16 LYS555:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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