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Nucleic atom dist Protein atom
DG5:B.OP1/1 2.95 THR178:A.OG1/1
DA6:B.OP2/1 2.56 LYS173:A.NZ/1
DT7:B.OP2/1 3.09 TYR217:A.OH/1
DA8:B.OP2/1 3.15 SER218:A.N/1
DG9:B.OP1/1 2.81 ARG220:A.NH1/1
DG9:B.OP2/1 2.79 SER218:A.OG/1
DT10:B.OP2/1 3.01 ASN206:A.N/1
DG11:B.OP1/1 2.79 PHE204:A.N/1
DG12:B.O3'/1 2.89 SER246:A.O/1
DG13:B.OP1/1 2.89 SER246:A.N/1
DG14:B.OP1/1 2.84 ASP282:A.N/1
DC16:B.OP1/1 2.45 SER80:A.OG/1
DG17:B.OP1/1 2.87 GLY85:A.N/1
DG27:C.OP1/1 2.79 LYS224:A.N/1
DA28:C.OP1/1 2.72 SER221:A.OG/1
DA28:C.OP2/1 2.88 SER221:A.OG/1
DA28:C.OP2/1 3.16 THR222:A.N/1
DC31:C.OP1/1 2.98 ARG32:A.N/1
DC32:D.OP2/1 2.54 ARG176:A.NH2/1
DC32:D.OP2/1 2.78 LYS186:A.NZ/1
DA33:D.OP1/1 3.02 LYS188:A.NZ/1
DA33:D.OP2/1 2.82 LYS186:A.NZ/1
DA33:D.N3/1 2.85 THR249:A.OG1/1
DC34:D.OP1/1 2.77 LYS274:A.NZ/1
DA36:D.OP1/1 2.76 ALA253:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:B.OP2/1 2.83 26:B/1 2.94 LYS180:A.N/1
DG12:B.O4'/1 2.91 304:A/1 2.65 GLY248:A.N/1
DG12:B.O4'/1 2.91 304:A/1 2.97 THR249:A.N/1
DG12:B.N2/1 3.21 29:B/1 2.94 PHE286:A.N/1
DG12:B.N3/1 2.92 29:B/1 2.94 PHE286:A.N/1
DG13:B.O4'/1 2.74 29:B/1 2.94 PHE286:A.N/1
DG13:B.O3'/1 2.83 37:B/1 2.85 LYS281:A.N/1
DG13:B.O3'/1 2.83 37:B/1 2.58 CYS283:A.O/1
DG14:B.OP1/1 2.51 37:B/1 2.85 LYS281:A.N/1
DG14:B.OP1/1 2.51 37:B/1 2.58 CYS283:A.O/1
DA28:C.N3/1 2.68 37:C/1 2.8 ARG48:A.NH2/1
DC29:C.O4'/1 3.17 37:C/1 2.8 ARG48:A.NH2/1
DC31:C.OP1/1 2.84 302:A/1 2.63 ARG32:A.O/1
DC31:C.OP1/1 2.84 302:A/1 2.68 ARG42:A.N/1
DC31:C.O3'/1 2.45 34:C/1 2.76 ASP29:A.OD1/1
DC31:C.O3'/1 2.45 34:C/1 2.94 GLY30:A.N/1
DC31:C.O3'/1 2.45 34:C/1 2.79 GLY30:A.O/1
DC31:C.O3'/1 3.23 367:A/1 2.34 GLU161:A.OE2/1
DC31:C.O2/1 2.75 32:C/1 2.92 ARG285:A.NH1/1
DC32:D.OP2/1 2.7 370:A/1 2.58 ALA9:A.N/1
DC32:D.OP2/1 2.7 370:A/1 3.12 ARG176:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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