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Nucleic atom dist Protein atom
A2:X.N6/1 2.76 GLU487:A.OE2/1
A3:X.OP1/1 2.89 HIS314:A.NE2/1
A3:X.O2'/1 2.68 ASN315:A.ND2/1
A3:X.N7/1 3.39 GLN294:A.NE2/1
A3:X.N6/1 3.14 GLN294:A.OE1/1
A4:X.OP1/1 2.85 PHE140:A.N/1
A4:X.O2'/1 3.09 LYS145:A.NZ/1
A4:X.N3/1 3.36 LYS145:A.NZ/1
A5:X.OP2/1 2.81 ASN226:A.ND2/1
A5:X.O2'/1 2.89 TYR87:A.OH/1
A5:X.O2'/1 2.72 ASP102:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
A3:X.OP1/1 2.59 730:X/1 2.98 ARG387:A.NH1/1
A3:X.OP2/1 2.53 734:X/1 2.85 GLN294:A.NE2/1
A3:X.O2'/1 2.76 723:X/1 3 ASN226:A.ND2/1
A3:X.N6/1 2.71 1101:A/1 3.22 ARG285:A.NH2/1
A3:X.N6/1 2.71 1101:A/1 2.35 ASP295:A.OD2/1
A4:X.OP1/1 2.81 716:X/1 3.06 VAL141:A.N/1
A4:X.OP2/1 2.62 727:X/1 3.08 ARG387:A.NH2/1
A4:X.O2'/1 2.82 808:A/1 2.74 VAL141:A.O/1
A4:X.N6/1 3.08 726:X/1 2.83 LYS377:A.O/1
A5:X.OP1/1 2.76 728:X/1 2.81 LYS145:A.NZ/1
A5:X.OP1/1 2.89 722:X/1 2.91 ILE227:A.N/1
A5:X.O4'/1 3.06 808:A/1 2.74 VAL141:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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