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Nucleic atom dist Protein atom
DT2:C.OP2/1 2.57 TYR616:B.OH/1
DG5:C.N7/1 2.71 LYS620:B.NZ/1
DG5:C.O6/1 2.61 LYS620:B.NZ/1
DG6:C.O6/1 3.27 LYS624:B.NZ/1
DC9:D.OP1/1 2.53 ARG575:B.N/1
DC9:D.OP2/1 2.81 ARG575:B.NE/1
DC9:D.OP2/1 3.04 ARG575:B.NH2/1
DC9:D.N4/1 2.98 ASP621:B.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC8:D.OP2/1 2.97 38:B/1 2.77 ASP618:B.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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