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Nucleic atom dist Protein atom
DT2:E.OP2/1 2.69 TYR616:A.OH/1
DT3:E.OP2/1 2.73 ARG601:A.N/1
DG5:E.N7/1 2.97 LYS620:A.NZ/1
DG5:E.O6/1 2.7 LYS620:A.NZ/1
DC8:F.OP1/1 2.06 HIS613:A.NE2/1
DC9:F.OP1/1 2.85 ARG575:A.N/1
DC9:F.OP2/1 2.78 ARG575:A.NE/1
DC9:F.OP2/1 2.89 ARG575:A.NH2/1
DC9:F.N4/1 2.94 ASP621:A.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA4:E.OP2/1 2.36 86:E/1 2.98 THR597:A.O/1
DC8:F.OP1/1 2.38 24:F/1 2.81 HIS613:A.O/1
DC8:F.OP1/1 2.38 24:F/1 2.88 ARG614:A.NH1/1
DC8:F.OP1/1 2.38 24:F/1 2.8 ASP618:A.OD2/1
DC8:F.OP2/1 2.54 24:F/1 2.81 HIS613:A.O/1
DC8:F.OP2/1 2.54 24:F/1 2.88 ARG614:A.NH1/1
DC8:F.OP2/1 2.71 23:F/1 2.74 ASP618:A.OD1/1
DC8:F.OP2/1 2.54 24:F/1 2.8 ASP618:A.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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