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Nucleic atom dist Protein atom
DG11:P.OP2/1 3.08 VAL311:B.N/1
DC8:T.OP1/1 2.71 TRP56:B.NE1/1
DA9:T.OP1/1 3.21 ASN398:B.N/1
DT10:T.OP1/1 2.95 ARG426:B.NH1/1
DT10:T.OP1/1 2.59 ARG426:B.NH2/1
DT10:T.OP2/1 2.66 MET396:B.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG5:T.N2/1 3.06 3037:B/1 3.01 ILE59:B.N/1
DG5:T.N2/1 3.06 3037:B/1 2.72 ARG73:B.O/1
DG5:T.N2/1 3.06 3037:B/1 3.1 ASP75:B.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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