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Nucleic atom dist Protein atom
DT1:C.O5'/1 2.42 SER32:B.O/1
DC2:C.OP2/1 2.76 LYS34:B.N/1
DT3:C.OP1/1 3.06 LYS116:B.NZ/1
DG4:C.OP1/1 3.25 ILE81:B.N/1
DG4:C.N7/1 3.26 ARG38:B.NH1/1
DG4:C.O6/1 2.43 ARG38:B.NH2/1
DT7:C.OP2/1 2.66 ARG68:B.NH1/1
DT7:C.OP2/1 2.42 ARG68:B.NH2/1
DG13:C.OP1/1 3.18 LYS48:A.NZ/1
DG13:C.OP1/1 3.06 LYS139:B.NZ/1
DA14:C.OP1/1 3.24 GLN47:A.NE2/1
DA14:C.OP2/1 2.8 LYS48:A.N/1
DA14:C.OP2/1 2.79 ARG51:A.NH2/1
DA15:C.OP2/1 3.13 GLY19:A.O/1
DG16:C.OP1/1 2.82 ASP137:A.N/1
DG16:C.OP2/1 2.92 SER22:A.OG/1
DG16:C.OP2/1 2.88 LYS98:A.NZ/1
DG16:C.N7/1 2.93 LYS44:A.NZ/1
DG16:C.N2/1 3.41 THR140:A.OG1/1
DG17:C.OP1/1 2.62 SER138:A.OG/1
DG17:C.OP2/1 2.9 ASN136:A.ND2/1
DA18:C.OP1/1 2.72 LYS142:A.N/1
DA18:C.OP1/1 3.04 THR143:A.N/1
DA18:C.OP2/1 2.85 GLN26:A.NE2/1
DA18:C.N7/1 2.82 GLN26:A.NE2/1
DT19:C.OP1/1 3.09 LYS142:A.NZ/1
DT19:C.O4/1 2.75 LYS40:A.NZ/1
DC20:C.N4/1 3.05 GLU28:A.OE1/1
DC20:C.N4/1 2.82 GLU28:A.OE2/1
DT2:E.OP2/1 2.85 LYS34:A.N/1
DA3:E.N7/1 2.57 TYR33:A.OH/1
DA3:E.N6/1 2.64 TYR33:A.OH/1
DG4:E.OP2/1 3.11 ILE81:A.N/1
DG4:E.N7/1 2.5 ARG38:A.NH2/1
DG4:E.O6/1 2.78 ARG38:A.NH1/1
DG5:E.O6/1 2.32 LYS40:A.NZ/1
DA6:E.N6/1 3.42 LYS40:A.NZ/1
DT7:E.OP2/1 2.05 ARG68:A.NH1/1
DT7:E.O5'/1 3 ARG68:A.NH2/1
DA13:E.OP1/1 2.92 LYS139:A.NZ/1
DA13:E.OP1/1 3.1 LYS48:B.NZ/1
DA14:E.OP1/1 3.23 GLN47:B.NE2/1
DA14:E.OP2/1 2.78 LYS48:B.N/1
DA14:E.OP2/1 2.73 ARG51:B.NH2/1
DA15:E.OP1/1 3.12 ALA19:B.O/1
DA16:E.OP1/1 2.85 ASP137:B.N/1
DA16:E.OP2/1 2.76 SER22:B.OG/1
DA16:E.OP2/1 2.96 LYS98:B.NZ/1
DA16:E.N7/1 3.18 GLN44:B.NE2/1
DA17:E.OP1/1 2.52 SER138:B.OG/1
DA17:E.OP2/1 2.96 ASN136:B.ND2/1
DA18:E.OP1/1 2.74 LYS142:B.N/1
DA18:E.OP1/1 3.03 THR143:B.N/1
DA18:E.OP2/1 2.97 GLN26:B.NE2/1
DA18:E.N7/1 2.81 GLN26:B.NE2/1
DG19:E.OP1/1 2.82 LYS142:B.NZ/1
DG19:E.N7/1 3.05 LYS40:B.NZ/1
DG19:E.O6/1 2.47 LYS40:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC2:C.OP2/1 3.23 1025:B/1 2.37 SER33:B.OG/1
DC5:C.OP2/1 2.75 1061:B/1 2.64 TYR66:B.OH/1
DC5:C.OP2/1 2.72 1016:C/1 2.77 SER79:B.N/1
DC5:C.OP2/1 2.72 1016:C/1 2.87 GLU80:B.N/1
DG13:C.OP1/1 2.73 1046:C/1 2.78 LYS48:A.NZ/1
DG13:C.OP2/1 2.66 1047:A/1 2.65 SER72:A.OG/1
DA15:C.OP2/1 2.27 1055:C/1 2.3 ASP20:A.OD1/1
DA15:C.OP2/1 2.27 1055:C/1 2.29 ASP20:B.OD1/1
DA15:C.O3'/1 2.9 1076:A/1 2.63 ASP137:A.OD2/1
DA15:C.N7/1 2.81 1057:C/1 2.93 ASN75:A.OD1/1
DA15:C.N3/1 2.82 1056:C/1 2.93 LYS139:A.NZ/1
DG16:C.OP2/1 2.7 1059:C/1 2.93 ILE23:A.N/1
DG16:C.OP2/1 2.7 1059:C/1 2.8 LYS98:A.NZ/1
DG16:C.OP2/1 2.7 1059:C/1 2.83 ASN136:A.OD1/1
DG16:C.O3'/1 3.04 1080:A/1 2.83 LYS139:A.N/1
DG16:C.O3'/1 3.04 1080:A/1 2.82 THR140:A.N/1
DG16:C.N3/1 2.78 1081:A/1 2.75 THR140:A.OG1/1
DG17:C.OP2/1 2.7 1061:C/1 2.95 ALA25:A.N/1
DG17:C.OP2/1 2.7 1061:C/1 2.85 ALA25:A.O/1
DG17:C.N7/1 2.9 1027:A/1 2.2 LYS44:A.NZ/1
DG17:C.O6/1 3.21 1027:A/1 2.2 LYS44:A.NZ/1
DA18:C.OP2/1 2.66 1062:C/1 3 ILE27:A.O/1
DA18:C.N6/1 2.76 1015:A/1 2.74 GLN26:A.OE1/1
DC21:C.N4/1 2.71 1069:C/1 3.11 GLU28:A.OE2/1
DC21:C.N4/1 2.71 1069:C/1 2.8 ASN30:A.ND2/1
DG4:E.OP1/1 2.79 1006:E/1 3.12 LYS82:A.N/1
DG5:E.OP2/1 2.95 1041:A/1 2.67 TYR66:A.OH/1
DG5:E.OP2/1 2.7 1009:E/1 2.87 SER79:A.N/1
DG5:E.OP2/1 2.7 1009:E/1 2.97 GLU80:A.N/1
DC9:E.N4/1 2.64 1016:E/1 2.72 GLU70:A.OE1/1
DA13:E.OP1/1 2.7 1029:E/1 2.9 LYS48:B.NZ/1
DA13:E.OP2/1 2.68 1032:E/1 2.68 SER72:B.OG/1
DA13:E.N7/1 2.6 1030:E/1 3.22 SER72:B.OG/1
DA15:E.OP1/1 2.32 1055:C/1 2.3 ASP20:A.OD1/1
DA15:E.OP1/1 2.32 1055:C/1 2.29 ASP20:B.OD1/1
DA15:E.O3'/1 2.98 1099:B/1 2.62 ASP137:B.OD2/1
DA15:E.N7/1 2.82 1038:E/1 3.04 ASN75:B.OD1/1
DA15:E.N3/1 2.76 1037:E/1 3.12 LYS139:B.NZ/1
DA16:E.OP2/1 2.75 1043:E/1 2.87 ILE23:B.N/1
DA16:E.OP2/1 2.75 1043:E/1 2.93 LYS98:B.NZ/1
DA16:E.OP2/1 2.75 1043:E/1 2.76 ASN136:B.OD1/1
DA16:E.O3'/1 3 1102:B/1 2.85 LYS139:B.N/1
DA16:E.O3'/1 3 1102:B/1 2.94 THR140:B.N/1
DA16:E.N6/1 2.72 1040:E/1 2.83 GLN44:B.OE1/1
DA16:E.N3/1 2.7 1041:E/1 2.71 THR140:B.OG1/1
DA17:E.OP2/1 2.82 1017:B/1 2.81 ALA25:B.N/1
DA17:E.OP2/1 2.82 1017:B/1 2.79 ALA25:B.O/1
DA17:E.N7/1 3.25 1036:B/1 2.76 GLN44:B.OE1/1
DA17:E.N6/1 2.91 1036:B/1 2.76 GLN44:B.OE1/1
DA17:E.N3/1 2.59 1044:E/1 3.21 THR140:B.OG1/1
DA18:E.OP1/1 3.21 1106:B/1 2.9 ILE27:B.N/1
DA18:E.OP2/1 2.53 1046:E/1 2.72 ILE27:B.O/1
DA18:E.N6/1 2.66 1045:E/1 2.75 GLN26:B.OE1/1
DA18:E.N6/1 2.66 1045:E/1 3.45 LYS40:B.NZ/1
DG19:E.OP2/1 2.77 1107:B/1 2.08 THR143:B.OG1/1
DG19:E.N7/1 2.32 1047:E/1 2.69 LYS40:B.NZ/1
DC21:E.N4/1 3 1022:B/1 2.74 ASN30:B.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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