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Nucleic atom dist Protein atom
DT1:C.O5'/1 2.49 SER32:B.O/1
DT2:C.OP2/1 2.77 LYS34:B.N/1
DA3:C.N7/1 2.35 TYR33:B.OH/1
DA3:C.N6/1 2.74 TYR33:B.OH/1
DG4:C.OP1/1 3.39 ILE81:B.N/1
DG4:C.N7/1 3.16 ARG38:B.NH1/1
DG4:C.O6/1 2.6 ARG38:B.NH2/1
DG5:C.N7/1 2.64 LYS40:B.NZ/1
DG5:C.O6/1 3.2 LYS40:B.NZ/1
DA13:C.OP1/1 3.18 LYS48:A.NZ/1
DA13:C.OP1/1 2.86 LYS139:B.NZ/1
DA14:C.OP1/1 3.27 GLN47:A.NE2/1
DA14:C.OP2/1 2.72 LYS48:A.N/1
DA14:C.OP2/1 2.82 ARG51:A.NH2/1
DA16:C.OP1/1 2.91 ASP137:A.N/1
DA16:C.OP2/1 2.76 SER22:A.OG/1
DA16:C.OP2/1 3.15 LYS98:A.NZ/1
DA16:C.N7/1 3.09 GLN44:A.NE2/1
DA17:C.OP1/1 2.56 SER138:A.OG/1
DA17:C.OP2/1 3 ASN136:A.ND2/1
DA18:C.OP1/1 2.72 LYS142:A.N/1
DA18:C.OP1/1 3.03 THR143:A.N/1
DA18:C.OP2/1 2.9 GLN26:A.NE2/1
DA18:C.N7/1 2.91 GLN26:A.NE2/1
DG19:C.N7/1 2.9 LYS28:A.NZ/1
DG19:C.O6/1 2.71 LYS28:A.NZ/1
DC2:E.OP2/1 2.92 LYS34:A.N/1
DG4:E.OP2/1 3.18 ILE81:A.N/1
DG4:E.N7/1 3.05 ARG38:A.NH1/1
DG4:E.N7/1 2.9 ARG38:A.NH2/1
DG4:E.O6/1 2.41 ARG38:A.NH2/1
DT7:E.OP2/1 1.93 ARG68:A.NH1/1
DT7:E.O5'/1 1.95 ARG68:A.NH2/1
DG13:E.OP1/1 2.96 LYS139:A.NZ/1
DG13:E.OP1/1 3.1 LYS48:B.NZ/1
DA14:E.OP1/1 3.22 GLN47:B.NE2/1
DA14:E.OP2/1 2.73 LYS48:B.N/1
DA14:E.OP2/1 2.88 ARG51:B.NH2/1
DA15:E.OP2/1 3.15 GLY19:B.O/1
DG16:E.OP1/1 2.88 ASP137:B.N/1
DG16:E.OP2/1 2.73 SER22:B.OG/1
DG16:E.OP2/1 3.13 LYS98:B.NZ/1
DG16:E.N7/1 3.28 LYS44:B.NZ/1
DG17:E.OP1/1 2.66 SER138:B.OG/1
DG17:E.OP2/1 2.91 ASN136:B.ND2/1
DA18:E.OP1/1 2.7 LYS142:B.N/1
DA18:E.OP1/1 3.17 THR143:B.N/1
DA18:E.OP2/1 2.86 GLN26:B.NE2/1
DA18:E.N7/1 2.81 GLN26:B.NE2/1
DT19:E.OP1/1 2.77 LYS142:B.NZ/1
DC20:E.N4/1 2.64 GLU28:B.OE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG4:C.OP1/1 2.97 2058:B/1 2.89 LYS82:B.N/1
DG5:C.OP2/1 2.91 2049:B/1 2.51 TYR66:B.OH/1
DG5:C.OP2/1 2.74 2009:C/1 2.86 SER79:B.N/1
DG5:C.OP2/1 2.74 2009:C/1 3 GLU80:B.N/1
DT11:C.OP1/1 2.58 2024:C/1 2.85 LYS139:B.O/1
DA13:C.OP1/1 2.8 2045:A/1 2.69 LYS48:A.NZ/1
DA13:C.OP2/1 2.68 2029:C/1 2.88 SER72:A.OG/1
DA15:C.OP2/1 2.23 2035:C/1 2.25 ASP20:A.OD1/1
DA15:C.OP2/1 2.23 2035:C/1 2.28 ASP20:B.OD1/1
DA15:C.O3'/1 3.02 2114:A/1 2.61 ASP137:A.OD2/1
DA15:C.N7/1 2.79 2034:C/1 3 ASN75:A.OD1/1
DA15:C.N3/1 2.9 2036:C/1 2.92 LYS139:A.NZ/1
DA16:C.OP2/1 2.72 2041:C/1 2.86 ILE23:A.N/1
DA16:C.OP2/1 2.72 2041:C/1 3.02 LYS98:A.NZ/1
DA16:C.OP2/1 2.72 2041:C/1 2.78 ASN136:A.OD1/1
DA16:C.O3'/1 2.85 2118:A/1 2.84 LYS139:A.N/1
DA16:C.O3'/1 2.85 2118:A/1 2.95 THR140:A.N/1
DA16:C.N6/1 2.76 2039:C/1 2.94 GLN44:A.OE1/1
DA16:C.N3/1 2.73 2123:A/1 2.69 THR140:A.OG1/1
DA17:C.OP2/1 2.73 2043:C/1 2.92 ALA25:A.N/1
DA17:C.OP2/1 2.73 2043:C/1 2.94 ALA25:A.O/1
DA17:C.N7/1 2.82 2042:C/1 2.9 GLN44:A.OE1/1
DA17:C.N6/1 3.15 2042:C/1 2.9 GLN44:A.OE1/1
DA17:C.N3/1 2.78 2122:A/1 2.78 THR140:A.OG1/1
DA18:C.OP2/1 2.96 2130:A/1 2.88 ILE27:A.N/1
DA18:C.OP2/1 2.72 2044:C/1 2.79 ILE27:A.O/1
DA18:C.OP2/1 2.96 2130:A/1 2.79 THR143:A.O/1
DA18:C.O4'/1 3.26 2122:A/1 2.78 THR140:A.OG1/1
DA18:C.N6/1 2.82 2017:A/1 2.58 GLN26:A.OE1/1
DA18:C.N6/1 2.82 2017:A/1 3.14 LYS28:A.NZ/1
DG19:C.OP2/1 2.71 2131:A/1 2.48 THR143:A.OG1/1
DG4:E.OP1/1 3.05 2072:A/1 2.89 LYS82:A.N/1
DG4:E.OP2/1 2.48 2008:E/1 3.25 SER79:A.O/1
DC5:E.OP2/1 2.91 2009:E/1 2.93 SER79:A.N/1
DC5:E.OP2/1 2.91 2009:E/1 3.01 GLU80:A.N/1
DG13:E.OP1/1 2.96 2025:E/1 3.06 LYS48:B.NZ/1
DG13:E.OP2/1 2.69 2029:E/1 2.81 SER72:B.OG/1
DA15:E.OP2/1 2.24 2035:C/1 2.25 ASP20:A.OD1/1
DA15:E.OP2/1 2.24 2035:C/1 2.28 ASP20:B.OD1/1
DA15:E.O3'/1 2.96 2096:B/1 2.78 ASP137:B.OD2/1
DA15:E.N7/1 2.8 2036:E/1 2.94 ASN75:B.OD1/1
DA15:E.N3/1 2.91 2034:E/1 2.97 LYS139:B.NZ/1
DG16:E.OP2/1 2.73 2038:E/1 2.84 ILE23:B.N/1
DG16:E.OP2/1 2.73 2038:E/1 3.1 LYS98:B.NZ/1
DG16:E.OP2/1 2.73 2038:E/1 2.76 ASN136:B.OD1/1
DG16:E.O3'/1 2.83 2041:E/1 2.85 LYS139:B.N/1
DG16:E.O3'/1 2.83 2041:E/1 3.02 THR140:B.N/1
DG16:E.O6/1 2.74 2039:E/1 2.94 LYS44:B.NZ/1
DG16:E.N2/1 2.97 2042:E/1 2.92 THR140:B.OG1/1
DG16:E.N3/1 2.77 2102:B/1 2.75 THR140:B.OG1/1
DG17:E.OP2/1 2.82 2044:E/1 2.85 ALA25:B.N/1
DG17:E.OP2/1 2.82 2044:E/1 2.84 ALA25:B.O/1
DG17:E.N3/1 2.83 2042:E/1 2.92 THR140:B.OG1/1
DA18:E.OP2/1 3.07 2107:B/1 2.99 ILE27:B.N/1
DA18:E.OP2/1 2.77 2010:B/1 2.69 ILE27:B.O/1
DA18:E.N6/1 2.78 2009:B/1 2.64 GLN26:B.OE1/1
DT19:E.OP2/1 2.68 2108:B/1 2.56 THR143:B.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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