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Nucleic atom dist Protein atom
DA18:C.OP1/1 2.8 SER9:B.OG/1
DA18:C.N3/1 2.76 SER110:A.OG/1
DG19:C.OP1/1 2.94 ASN109:A.ND2/1
DC20:C.OP1/1 2.82 TYR27:A.N/1
DC20:C.OP2/1 2.93 LYS26:A.NZ/1
DC21:C.OP1/1 2.69 TYR27:A.OH/1
DC21:C.OP2/1 2.65 LYS26:A.NZ/1
DT29:C.OP1/1 2.87 ARG87:A.NH2/1
DT29:C.OP2/1 2.92 ARG87:A.NE/1
DT30:C.O3'/1 3.24 ARG90:A.NE/1
DT31:C.OP2/1 3.38 ARG90:A.NE/1
DT31:C.OP2/1 3.07 ARG90:A.NH2/1
DA32:C.O5'/1 3.35 ARG90:A.NH2/1
DG33:C.OP1/1 2.74 ARG93:A.NE/1
DG33:C.OP2/1 3.02 ARG93:A.NH2/1
DC34:C.OP1/1 2.58 SER89:A.OG/1
DC34:C.OP1/1 2.92 LEU106:A.N/1
DC34:C.OP1/1 3 TRP107:A.N/1
DT35:C.OP1/1 2.82 LYS85:A.NZ/1
DT37:C.N3/1 2.87 LEU51:B.O/1
DG38:C.OP2/1 2.84 HIS11:B.N/1
DG38:C.N7/1 3.24 ASN12:B.ND2/1
DG39:C.OP2/1 2.8 HIS11:B.NE2/1
DA18:D.OP1/1 2.77 SER9:A.OG/1
DA18:D.N3/1 2.96 SER110:B.OG/1
DG19:D.OP1/1 2.9 ASN109:B.ND2/1
DC20:D.OP1/1 2.8 TYR27:B.N/1
DC20:D.OP2/1 2.91 LYS26:B.NZ/1
DC21:D.OP1/1 2.69 TYR27:B.OH/1
DC21:D.OP2/1 2.69 LYS26:B.NZ/1
DG26:D.N2/1 3.19 LYS82:B.NZ/1
DC27:D.O2/1 3.01 LYS82:B.NZ/1
DT29:D.OP2/1 2.7 ARG87:B.NE/1
DT29:D.OP2/1 3.09 ARG87:B.NH2/1
DT30:D.OP1/1 2.93 ARG90:B.NE/1
DT30:D.OP1/1 2.91 ARG90:B.NH2/1
DG33:D.OP1/1 2.79 ARG93:B.NE/1
DG33:D.OP2/1 3.1 ARG93:B.NH2/1
DC34:D.OP1/1 2.58 SER89:B.OG/1
DC34:D.OP1/1 3 LEU106:B.N/1
DC34:D.OP1/1 3.07 TRP107:B.N/1
DT35:D.OP1/1 2.78 LYS85:B.NZ/1
DT37:D.N3/1 2.83 LEU51:A.O/1
DG38:D.OP2/1 2.86 HIS11:A.N/1
DG38:D.N7/1 3.22 ASN12:A.ND2/1
DG39:D.OP2/1 2.69 HIS11:A.NE2/1
DA-2:E.N3/1 2.87 ARG28:A.NH1/1
DC-1:E.O4'/1 2.77 ARG28:A.NH2/1
DC-1:E.O3'/1 3.17 ASN130:B.OD1/1
DC-1:E.O2/1 2.93 ARG28:A.NH1/1
DA-2:F.N3/1 3 ARG28:B.NH1/1
DC-1:F.O4'/1 2.69 ARG28:B.NH2/1
DC-1:F.O3'/1 3.28 ASN130:A.ND2/1
DC-1:F.O2/1 2.86 ARG28:B.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA18:C.N6/1 3 2009:C/1 3.02 TYR127:B.O/1
DG19:C.OP1/1 2.69 2009:B/1 2.68 HIS11:B.O/1
DG19:C.OP1/1 2.69 2009:B/1 3.24 ASN12:B.OD1/1
DG33:C.OP1/1 2.68 2053:A/1 2.62 ARG90:A.O/1
DG33:C.OP1/1 2.68 2053:A/1 2.96 ARG90:A.NH1/1
DG33:C.OP1/1 2.68 2053:A/1 2.92 LYS100:A.NZ/1
DG33:C.OP2/1 2.75 2030:C/1 3.07 PRO104:A.O/1
DT35:C.OP1/1 2.84 2036:C/1 2.9 ASN109:A.O/1
DT35:C.OP2/1 2.67 2035:C/1 2.82 ASN109:A.O/1
DA36:C.OP2/1 2.79 2038:C/1 2.89 SER74:B.OG/1
DT37:C.O2/1 3.05 2046:B/1 2.86 ASP72:B.N/1
DG38:C.OP1/1 2.64 2043:C/1 2.81 ARG52:B.NH1/1
DG38:C.OP2/1 2.74 2041:C/1 2.88 ASN12:B.ND2/1
DG38:C.O6/1 2.64 2044:C/1 2.73 ASN12:B.OD1/1
DG39:C.OP2/1 3.26 2043:C/1 2.81 ARG52:B.NH1/1
DG39:C.O6/1 3.05 2044:C/1 2.73 ASN12:B.OD1/1
DA18:D.N6/1 3.01 2009:D/1 3.12 TYR127:A.O/1
DG19:D.OP1/1 2.64 2012:D/1 2.73 HIS11:A.O/1
DG19:D.OP1/1 2.64 2012:D/1 3.21 ASN109:B.ND2/1
DG26:D.N2/1 3.18 2049:B/1 3.04 LYS82:B.NZ/1
DT30:D.OP1/1 2.83 2030:D/1 2.97 GLN94:B.OE1/1
DT30:D.OP1/1 2.83 2030:D/1 2.98 GLN94:B.NE2/1
DG33:D.OP1/1 2.69 2036:D/1 2.7 ARG90:B.O/1
DG33:D.OP1/1 2.69 2036:D/1 3.05 ARG90:B.NH1/1
DG33:D.OP1/1 2.69 2036:D/1 2.89 LYS100:B.NZ/1
DG33:D.OP2/1 2.91 2061:B/1 2.75 PRO104:B.O/1
DC34:D.OP2/1 2.82 2062:B/1 2.82 TRP107:B.O/1
DT35:D.OP1/1 2.79 2040:D/1 2.96 ASN109:B.O/1
DT35:D.OP2/1 2.63 2039:D/1 2.68 ASN109:B.O/1
DA36:D.OP1/1 2.71 2041:D/1 2.75 SER74:A.O/1
DA36:D.OP2/1 2.72 2042:D/1 2.85 SER74:A.OG/1
DT37:D.O2/1 3.03 2037:A/1 2.85 ARG52:A.O/1
DT37:D.O2/1 3.03 2037:A/1 2.96 ASP72:A.N/1
DT37:D.O2/1 3.01 2049:A/1 2.67 ASP72:A.OD2/1
DG38:D.OP1/1 2.79 2039:A/1 2.69 ARG52:A.NH1/1
DG38:D.OP2/1 2.71 2048:D/1 2.95 ASN12:A.ND2/1
DG38:D.O6/1 2.6 2045:D/1 2.7 ASN12:A.OD1/1
DG39:D.OP2/1 3.11 2039:A/1 2.69 ARG52:A.NH1/1
DG39:D.O6/1 3.03 2045:D/1 2.7 ASN12:A.OD1/1
DT-4:E.OP2/1 2.78 2012:E/1 3.11 ARG29:A.NH1/1
DT-4:E.OP2/1 2.79 2018:A/1 2.7 ARG29:A.NH2/1
DT-3:E.OP2/1 2.76 2016:A/1 2.73 TYR27:A.O/1
DC-1:E.N4/1 3.08 2066:B/1 2.8 GLN126:B.NE2/1
DT-3:F.OP2/1 2.83 2021:B/1 2.7 TYR27:B.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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