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Nucleic atom dist Protein atom
DA104:L.N6/1 3.49 LYS63:A.NZ/1
DC105:L.OP2/1 2.74 THR70:A.OG1/1
DC105:L.O3'/1 3.17 LYS121:A.N/1
DC105:L.N4/1 2.89 ASN67:A.OD1/1
DC106:L.OP1/1 3 LYS121:A.N/1
DC106:L.N4/1 2.94 GLU71:A.OE2/1
DC107:L.OP1/1 3.37 LYS124:A.NZ/1
DC107:L.OP2/1 2.92 ARG10:A.NH1/1
DG108:L.OP1/1 2.67 LYS201:A.NZ/1
DG108:L.N7/1 2.86 ARG15:A.NH1/1
DG108:L.O6/1 2.83 ARG15:A.NH1/1
DT109:L.O4/1 2.82 SER204:A.OG/1
DC202:M.OP1/1 2.81 ARG211:A.NH1/1
DC202:M.OP1/1 3.24 ARG211:A.NH1/1
DC203:M.OP2/1 2.89 ARG211:A.NE/1
DC203:M.OP2/1 3 ASN215:A.ND2/1
DA204:M.OP1/1 2.77 ASN20:A.N/1
DA204:M.OP2/1 3.08 LYS19:A.N/1
DA204:M.N7/1 2.96 GLN208:A.NE2/1
DA204:M.N6/1 3.52 ARG15:A.NH1/1
DA204:M.N6/1 2.9 GLN208:A.OE1/1
DC205:M.OP1/1 2.87 HIS68:A.NE2/1
DG206:M.OP2/1 3.13 THR61:A.N/1
DG206:M.OP2/1 2.92 THR61:A.OG1/1
DG206:M.OP2/1 2.81 THR64:A.OG1/1
DG207:M.N7/1 3.04 LYS63:A.NZ/1
DG208:M.O6/1 2.74 LYS63:A.NZ/1
DA210:M.N3/1 2.94 LYS121:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT103:L.OP2/1 2.7 2022:L/1 3.15 LYS62:A.NZ/1
DA104:L.OP2/1 2.74 2027:L/1 2.84 ARG69:A.NH2/1
DA104:L.N6/1 2.89 2105:A/1 2.81 LYS63:A.NZ/1
DA104:L.N3/1 2.81 2176:A/1 2.8 LYS121:A.NZ/1
DC105:L.OP1/1 2.66 2031:L/1 2.82 THR70:A.O/1
DC106:L.OP2/1 2.81 2018:A/1 2.77 THR12:A.OG1/1
DC106:L.OP2/1 2.81 2018:A/1 2.85 ASP120:A.OD1/1
DC107:L.OP1/1 2.48 2038:L/1 2.57 TYR205:A.OH/1
DC107:L.OP2/1 2.79 2037:L/1 2.93 ARG10:A.NH2/1
DC107:L.OP2/1 2.84 2019:A/1 2.79 THR12:A.OG1/1
DC107:L.N4/1 3.3 2121:A/1 2.85 ARG15:A.N/1
DC107:L.N4/1 3.08 2024:A/1 2.61 ARG15:A.O/1
DC107:L.N4/1 3.08 2024:A/1 2.82 GLU71:A.OE1/1
DG108:L.OP2/1 2.82 2042:L/1 2.83 ARG15:A.NH2/1
DG108:L.OP2/1 2.81 2265:A/1 2.78 GLU202:A.N/1
DG108:L.OP2/1 2.82 2042:L/1 2.86 SER204:A.OG/1
DG108:L.N7/1 3.4 2042:L/1 2.83 ARG15:A.NH2/1
DG108:L.N7/1 3.4 2042:L/1 2.86 SER204:A.OG/1
DC203:M.OP1/1 2.65 2017:M/1 2.77 LYS19:A.NZ/1
DC203:M.OP2/1 2.84 2019:M/1 2.91 GLU212:A.OE2/1
DA204:M.OP2/1 2.68 2020:M/1 2.82 GLU212:A.OE2/1
DC205:M.OP2/1 2.75 2022:M/1 2.8 LYS17:A.NZ/1
DC205:M.N4/1 3.03 2027:A/1 2.98 GLY16:A.O/1
DC205:M.N4/1 3.03 2027:A/1 3.34 LYS17:A.NZ/1
DG206:M.OP1/1 2.61 2027:M/1 2.94 GLU59:A.O/1
DG206:M.OP1/1 2.61 2027:M/1 2.73 GLU59:A.O/1
DG206:M.N7/1 2.83 2022:M/1 2.8 LYS17:A.NZ/1
DG207:M.OP2/1 2.79 2032:M/1 3.29 LYS63:A.NZ/1
DC211:M.OP1/1 2.84 2051:M/1 2.88 ASP123:A.OD2/1
DC211:M.O3'/1 3.2 2177:A/1 2.95 LEU122:A.N/1
DC212:M.OP1/1 3.04 2177:A/1 2.95 LEU122:A.N/1
DC212:M.OP2/1 2.66 2056:M/1 2.92 LYS266:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2017

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