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Nucleic atom dist Protein atom
DT5:B.OP1/1 2.75 SER166:A.OG/1
DT5:B.OP2/1 2.9 LEU167:A.N/1
DG6:B.OP2/1 2.9 THR150:A.OG1/1
DG6:B.N7/1 2.87 ARG124:A.NH2/1
DG6:B.O6/1 2.83 ARG124:A.NH1/1
DG6:B.O6/1 3.22 ARG124:A.NH2/1
DC8:B.N4/1 3.03 ASP154:A.OD1/1
DC8:B.N4/1 3.19 ASP154:A.OD2/1
DG10:B.N7/1 2.77 ARG157:A.NH1/1
DG10:B.O6/1 2.65 ARG157:A.NH2/1
DA13:B.OP2/1 2.91 LYS43:A.NZ/1
DA14:B.OP2/1 2.85 LYS43:A.N/1
DA14:B.N7/1 2.7 THR76:A.OG1/1
DA14:B.N6/1 2.57 THR76:A.OG1/1
DG15:B.OP2/1 2.63 GLY20:A.O/1
DG15:B.N7/1 2.96 ARG77:A.NE/1
DT16:B.OP2/1 2.57 TYR25:A.OH/1
DG21:B.N7/1 3.39 ARG33:A.NH1/1
DG21:B.O6/1 2.69 ARG33:A.NH1/1
DG4:C.OP1/1 2.72 LYS85:A.NZ/1
DG4:C.OP2/1 2.63 SER34:A.OG/1
DG4:C.OP2/1 2.65 TYR36:A.OH/1
DG4:C.N7/1 3.29 SER34:A.N/1
DC5:C.OP2/1 2.76 LYS85:A.N/1
DC5:C.N4/1 3.19 SER34:A.O/1
DC6:C.OP1/1 2.87 LYS68:A.N/1
DC6:C.N4/1 3.06 GLU35:A.OE1/1
DG7:C.OP1/1 2.99 LYS68:A.NZ/1
DG8:C.N7/1 3.01 ARG81:A.NH1/1
DG8:C.N7/1 2.99 ARG81:A.NH2/1
DG8:C.O6/1 2.85 ARG37:A.NH2/1
DA9:C.N6/1 3.15 ARG81:A.NH2/1
DA14:C.OP2/1 3.27 LYS130:A.NZ/1
DC15:C.OP1/1 2.66 GLU117:A.OE2/1
DC15:C.OP1/1 3.49 ASN129:A.ND2/1
DC15:C.OP2/1 2.83 LYS130:A.N/1
DC15:C.N4/1 2.63 ASP155:A.OD2/1
DC15:C.N4/1 3.18 ARG157:A.NH2/1
DC17:C.OP2/1 2.96 LYS120:A.N/1
DG18:C.N7/1 2.92 ARG126:A.NH2/1
DG18:C.O6/1 2.9 ARG126:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT4:B.OP1/1 2.92 2123:A/1 2.84 LEU167:A.O/1
DT4:B.OP1/1 2.92 2123:A/1 2.82 ARG170:A.NH1/1
DT5:B.OP2/1 2.58 2009:B/1 3.24 ASN164:A.ND2/1
DG6:B.OP1/1 3.12 2103:A/1 2.91 THR150:A.O/1
DG6:B.OP1/1 3.12 2103:A/1 2.96 THR150:A.OG1/1
DC7:B.OP2/1 2.82 2015:B/1 2.84 LEU153:A.O/1
DC7:B.N4/1 3.17 2105:A/1 3.2 ARG126:A.NH1/1
DC7:B.N4/1 3.17 2105:A/1 3.12 ASP154:A.OD1/1
DG11:B.O6/1 2.58 2024:B/1 2.72 HIS158:A.NE2/1
DG15:B.OP2/1 2.24 2031:B/1 2.89 GLY20:A.O/1
DG15:B.OP2/1 2.12 2031:C/1 2.34 GLY20:A.O/1
DG15:B.OP2/1 2.24 2031:B/1 2.4 ASP21:A.OD1/1
DG15:B.OP2/1 2.24 2031:B/1 2.25 GLU117:A.OE1/1
DG15:B.OP2/1 2.12 2031:C/1 2.13 GLU117:A.OE2/1
DT16:B.OP2/1 3.05 2034:B/1 3.09 LEU24:A.N/1
DT17:B.O4/1 2.71 2053:A/1 2.92 ARG37:A.NH1/1
DT17:B.O4/1 2.71 2053:A/1 2.56 GLU79:A.OE2/1
DC3:C.N4/1 2.74 2013:A/1 2.42 GLY31:A.O/1
DG4:C.OP2/1 2.8 2010:C/1 3.46 LYS28:A.NZ/1
DC5:C.OP1/1 2.63 2016:C/1 2.92 LYS86:A.N/1
DC5:C.OP2/1 2.62 2017:C/1 3.02 TYR36:A.N/1
DC5:C.OP2/1 2.62 2017:C/1 2.91 SER83:A.OG/1
DC6:C.OP1/1 2.64 2048:A/1 2.59 LYS68:A.O/1
DC6:C.OP1/1 2.64 2048:A/1 2.97 GLN70:A.NE2/1
DC6:C.OP1/1 2.64 2048:A/1 2.95 SER83:A.N/1
DG7:C.N7/1 2.87 2049:A/1 2.9 GLU35:A.OE2/1
DG7:C.N7/1 2.87 2049:A/1 2.84 GLN70:A.NE2/1
DG7:C.N7/1 2.87 2049:A/1 3.1 ARG81:A.NH1/1
DG8:C.OP2/1 2.69 2018:C/1 3.11 ILE71:A.O/1
DA9:C.N7/1 2.82 2054:A/1 2.98 ARG77:A.NH1/1
DA9:C.N7/1 2.82 2054:A/1 3.3 ARG77:A.NH2/1
DA9:C.N7/1 2.82 2054:A/1 2.66 GLU79:A.OE1/1
DC15:C.OP1/1 2.85 2002:A/1 2.56 ILE19:A.O/1
DC15:C.OP1/1 2.05 2031:C/1 2.13 GLU117:A.OE2/1
DC15:C.OP1/1 2.85 2002:A/1 3.18 ASN129:A.ND2/1
DC16:C.OP2/1 2.41 2031:B/1 2.89 GLY20:A.O/1
DC16:C.OP2/1 2.41 2031:B/1 2.4 ASP21:A.OD1/1
DC16:C.OP2/1 2.41 2031:B/1 2.25 GLU117:A.OE1/1
DC17:C.OP2/1 2.93 2077:A/1 2.85 ASP119:A.OD1/1
DC17:C.O5'/1 3.12 2077:A/1 2.85 ASP119:A.OD1/1
DG24:C.N3/1 2.79 2044:C/1 3.4 ARG168:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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