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Nucleic atom dist Protein atom
DG4:E.OP1/1 3.13 GLN37:B.N/1
DG4:E.OP2/1 2.51 ALA38:B.N/1
DG4:E.N7/1 2.98 ARG48:B.NE/1
DG4:E.O6/1 3.11 ARG48:B.NH2/1
DT5:E.OP2/1 2.95 GLN37:B.NE2/1
DT5:E.OP2/1 2.45 SER52:B.OG/1
DT7:E.O4/1 3.02 GLN53:B.NE2/1
DG9:E.OP1/1 2.53 GLY20:A.N/1
DG9:E.OP2/1 2.74 ARG57:A.NE/1
DC10:E.OP2/1 3.17 ARG57:A.NH2/1
DT11:E.OP2/1 3 THR47:A.N/1
DT11:E.OP2/1 2.7 THR47:A.OG1/1
DT11:E.O4/1 2.97 GLN53:A.NE2/1
DG4:F.OP1/1 3.35 GLN37:A.N/1
DG4:F.OP2/1 2.67 ALA38:A.N/1
DG4:F.N7/1 2.96 ARG48:A.NE/1
DG4:F.O6/1 3.07 ARG48:A.NH2/1
DT5:F.OP2/1 3.06 GLN37:A.NE2/1
DT5:F.OP2/1 2.67 SER52:A.OG/1
DT7:F.O4/1 3.04 GLN53:A.NE2/1
DG9:F.OP1/1 2.75 GLY20:B.N/1
DG9:F.OP2/1 2.83 ARG57:B.NE/1
DC10:F.OP2/1 3.12 ARG57:B.NH2/1
DC10:F.N4/1 2.68 GLN53:B.OE1/1
DT11:F.OP2/1 2.86 THR47:B.N/1
DT11:F.OP2/1 2.69 THR47:B.OG1/1
DT11:F.O4/1 2.81 GLN53:B.NE2/1
DG4:G.OP2/1 2.73 ALA38:A.N/1
DG4:G.N7/1 3.14 ARG48:A.NE/1
DG4:G.O6/1 2.92 ARG48:A.NH2/1
DT5:G.OP2/1 2.86 GLN37:A.NE2/1
DT5:G.OP2/1 2.74 SER52:A.OG/1
DT7:G.O4/1 2.62 GLN53:A.NE2/1
DG9:G.OP1/1 2.91 GLY20:B.N/1
DG9:G.OP2/1 2.73 ARG57:B.NE/1
DC10:G.N4/1 3.35 GLN53:B.OE1/1
DT11:G.OP2/1 3.14 THR47:B.N/1
DT11:G.OP2/1 2.71 THR47:B.OG1/1
DT11:G.O4/1 2.93 GLN53:B.NE2/1
DG4:H.OP2/1 3.01 ALA38:B.N/1
DG4:H.N7/1 3.23 ARG48:B.NE/1
DG4:H.O6/1 3.33 ARG48:B.NH2/1
DT5:H.OP2/1 2.82 GLN37:B.NE2/1
DT5:H.OP2/1 2.97 SER52:B.OG/1
DT7:H.O4/1 2.92 GLN53:B.NE2/1
DG9:H.OP1/1 3.02 GLY20:A.N/1
DG9:H.OP2/1 3.06 THR23:A.OG1/1
DG9:H.OP2/1 2.68 ARG57:A.NE/1
DC10:H.OP1/1 2.73 GLN22:A.NE2/1
DC10:H.N4/1 2.85 GLN53:A.OE1/1
DT11:H.OP2/1 3.12 THR47:A.N/1
DT11:H.OP2/1 2.48 THR47:A.OG1/1
DT11:H.O4/1 2.96 GLN53:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT5:E.OP2/1 2.95 2061:B/1 2.76 SER52:B.O/1
DT5:E.O4/1 2.86 2028:G/1 3.08 GLY49:B.N/1
DT6:E.OP2/1 2.61 2008:E/1 3.28 HIS56:B.ND1/1
DA8:E.OP1/1 2.58 2022:A/1 2.57 GLU18:A.OE1/1
DG9:E.OP1/1 3.1 2012:H/1 3.04 THR23:A.N/1
DG9:E.OP1/1 3.1 2012:H/1 2.68 THR23:A.OG1/1
DG9:E.OP2/1 2.6 2017:E/1 2.66 GLU18:A.O/1
DC10:E.OP2/1 2.61 2023:E/1 3.04 GLN22:A.NE2/1
DC10:E.OP2/1 2.61 2023:E/1 2.94 THR23:A.OG1/1
DC10:E.OP2/1 2.49 2024:E/1 2.72 ALA50:A.O/1
DC10:E.OP2/1 2.49 2024:E/1 3 ARG57:A.NH1/1
DC10:E.OP2/1 2.49 2024:E/1 3.09 ARG57:A.NH2/1
DC10:E.N4/1 2.9 2022:E/1 3.01 GLN53:A.OE1/1
DT11:E.OP1/1 2.91 2015:H/1 2.75 GLY45:A.O/1
DA12:E.N7/1 2.76 2026:E/1 2.82 THR47:A.OG1/1
DA12:E.N6/1 2.79 2026:E/1 2.82 THR47:A.OG1/1
DA13:E.N6/1 3.08 2026:E/1 2.82 THR47:A.OG1/1
DA13:E.N6/1 3.38 2006:F/1 3.05 GLY49:A.N/1
DT5:F.OP1/1 2.89 2011:G/1 2.77 LYS3:A.NZ/1
DT5:F.OP2/1 3.12 2010:G/1 2.78 SER52:A.O/1
DT5:F.O4/1 2.75 2006:F/1 3.05 GLY49:A.N/1
DA8:F.OP1/1 2.7 2011:F/1 2.9 GLU18:B.OE1/1
DG9:F.OP1/1 2.75 2014:F/1 3.18 THR23:B.N/1
DG9:F.OP1/1 2.75 2014:F/1 2.78 THR23:B.OG1/1
DG9:F.OP2/1 2.6 2016:F/1 2.8 GLU18:B.O/1
DC10:F.OP1/1 2.88 2020:F/1 3.01 THR23:B.OG1/1
DC10:F.OP2/1 2.69 2020:F/1 3.01 THR23:B.OG1/1
DC10:F.OP2/1 2.47 2019:F/1 2.72 ALA50:B.O/1
DC10:F.OP2/1 2.47 2019:F/1 3 ARG57:B.NH1/1
DT11:F.OP1/1 2.68 2025:G/1 2.97 GLY45:B.O/1
DA12:F.N7/1 2.72 2021:F/1 2.76 THR47:B.OG1/1
DA12:F.N7/1 2.72 2021:F/1 3.25 GLY49:B.N/1
DA12:F.N6/1 3.01 2021:F/1 2.76 THR47:B.OG1/1
DA12:F.N6/1 3.01 2021:F/1 3.25 GLY49:B.N/1
DA13:F.N6/1 3.22 2021:F/1 2.76 THR47:B.OG1/1
DA13:F.N6/1 3.26 2028:G/1 3.08 GLY49:B.N/1
DT5:G.OP1/1 2.67 2011:G/1 2.77 LYS3:A.NZ/1
DT5:G.OP2/1 2.73 2010:G/1 2.78 SER52:A.O/1
DA8:G.OP1/1 2.94 2011:F/1 2.9 GLU18:B.OE1/1
DG9:G.OP1/1 2.85 2014:F/1 3.18 THR23:B.N/1
DG9:G.OP1/1 2.85 2014:F/1 2.78 THR23:B.OG1/1
DG9:G.OP2/1 2.95 2016:F/1 2.8 GLU18:B.O/1
DC10:G.OP2/1 2.84 2020:F/1 3.01 THR23:B.OG1/1
DC10:G.OP2/1 2.88 2019:F/1 2.72 ALA50:B.O/1
DC10:G.OP2/1 2.88 2019:F/1 3 ARG57:B.NH1/1
DT11:G.OP1/1 2.48 2025:G/1 2.97 GLY45:B.O/1
DA12:G.N7/1 3 2021:F/1 2.76 THR47:B.OG1/1
DA12:G.N7/1 3 2021:F/1 3.25 GLY49:B.N/1
DA12:G.N6/1 3.1 2021:F/1 2.76 THR47:B.OG1/1
DA12:G.N6/1 3.1 2021:F/1 3.25 GLY49:B.N/1
DA13:G.N6/1 3.11 2021:F/1 2.76 THR47:B.OG1/1
DA13:G.N6/1 2.85 2028:G/1 3.08 GLY49:B.N/1
DA14:G.N6/1 2.75 2030:G/1 3.19 ARG48:B.NH2/1
DT5:H.OP2/1 3.01 2061:B/1 2.76 SER52:B.O/1
DT6:H.OP2/1 2.78 2008:E/1 3.28 HIS56:B.ND1/1
DA8:H.OP1/1 2.69 2022:A/1 2.57 GLU18:A.OE1/1
DG9:H.OP1/1 2.57 2012:H/1 3.04 THR23:A.N/1
DG9:H.OP1/1 2.57 2012:H/1 2.68 THR23:A.OG1/1
DC10:H.OP2/1 2.98 2023:E/1 3.04 GLN22:A.NE2/1
DC10:H.OP2/1 2.98 2023:E/1 2.94 THR23:A.OG1/1
DC10:H.OP2/1 3.08 2024:E/1 2.72 ALA50:A.O/1
DC10:H.OP2/1 3.08 2024:E/1 3 ARG57:A.NH1/1
DC10:H.OP2/1 3.08 2024:E/1 3.09 ARG57:A.NH2/1
DT11:H.OP1/1 2.39 2015:H/1 2.75 GLY45:A.O/1
DA12:H.N7/1 2.95 2026:E/1 2.82 THR47:A.OG1/1
DA12:H.N6/1 3.23 2026:E/1 2.82 THR47:A.OG1/1
DA13:H.N6/1 3.23 2026:E/1 2.82 THR47:A.OG1/1
DA13:H.N6/1 2.89 2006:F/1 3.05 GLY49:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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