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Nucleic atom dist Protein atom
DA7:P.OP2/1 3.15 THR469:A.O/1
DA7:P.OP2/1 3.44 ALA471:A.N/1
DG8:P.OP1/1 2.85 THR469:A.N/1
DG8:P.OP1/1 3.25 ARG470:A.NH1/1
DT11:P.OP1/1 2.7 GLY358:A.N/1
DT11:P.OP1/1 3.28 THR361:A.N/1
DT11:P.OP2/1 3.05 VAL360:A.N/1
DT12:P.OP2/1 3.02 ILE357:A.O/1
DC13:P.O3'/1 2.33 ASP198:A.OD1/1
DC4:T.OP2/1 3.24 ARG507:A.NH2/1
DC4:T.N4/1 2.68 THR44:A.OG1/1
DG6:T.OP1/1 2.98 THR421:A.N/1
DG6:T.OP2/1 2.34 THR421:A.OG1/1
DA7:T.OP2/1 2.6 GLU419:A.N/1
DA8:T.OP1/1 2.81 SER417:A.N/1
DT9:T.OP1/1 3.06 LYS414:A.N/1
DT9:T.OP1/1 2.94 SER415:A.N/1
DT12:T.OP1/1 2.94 SER388:A.OG/1
DT12:T.OP2/1 2.36 SER391:A.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT12:P.OP2/1 2.56 2007:A/1 2.49 VAL354:A.O/1
DT12:P.OP2/1 2.56 2007:A/1 2.4 ILE357:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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