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Nucleic atom dist Protein atom
DT-6:O.N3/1 2.76 LYS279:A.O/1
DG0:O.N2/1 3 SER58:A.OG/1
DC3:O.OP1/1 3.15 TRP56:A.NE1/1
DT4:O.OP1/1 3.01 ASN398:A.N/1
DC5:O.OP1/1 2.92 ARG426:A.NH1/1
DC5:O.OP1/1 2.37 ARG426:A.NH2/1
DC5:O.OP2/1 2.91 MET396:A.N/1
DA6:O.OP1/1 3.19 LYS393:A.N/1
DT2:P.OP1/1 3.33 ARG456:A.NE/1
DG3:P.OP1/1 2.48 ARG456:A.NH1/1
DG3:P.OP2/1 3 ARG456:A.NH2/1
DA7:P.OP1/1 2.79 VAL311:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG0:O.N2/1 2.78 2005:A/1 2.84 ILE59:A.N/1
DG0:O.N2/1 2.78 2005:A/1 2.56 ASP75:A.O/1
DC3:O.OP2/1 2.86 2001:O/1 2.98 VAL126:A.N/1
DC3:O.OP2/1 2.96 2040:A/1 2.7 ASN400:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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