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Nucleic atom dist Protein atom
DG5:V.OP1/1 2.63 ARG1092:S.NH1/1
DT6:V.OP1/1 2.75 LYS1043:S.NZ/1
DT6:V.OP1/1 2.89 HIS1046:S.NE2/1
DA7:V.OP2/1 3.25 HIS1079:S.NE2/1
DA7:V.O3'/1 3.23 HIS1081:S.ND1/1
DG8:V.OP1/1 3.36 HIS1081:S.ND1/1
DG8:V.OP2/1 3.16 GLY1082:S.N/1
DG8:V.N3/1 3.51 LYS460:S.N/1
DG9:V.OP2/1 2.55 ARG1122:U.NH2/1
DG10:V.OP1/1 3.01 ASP437:S.N/1
DG10:V.OP1/1 2.97 SER438:S.N/1
DG10:V.OP1/1 2.65 SER438:S.OG/1
DA15:V.OP2/1 3.32 ASN463:U.N/1
DC16:V.OP1/1 2.73 HIS515:U.NE2/1
DC16:V.OP2/1 2.67 ASN463:U.ND2/1
DC16:V.O5'/1 2.62 LYS466:U.NZ/1
DG17:V.OP1/1 3.3 GLY1178:U.N/1
DG17:V.OP2/1 3.19 LYS466:U.NZ/1
DT20:V.OP1/1 2.95 SER1330:U.OG/1
DG5:W.OP1/1 2.46 ARG1092:U.NH1/1
DA7:W.OP2/1 2.89 HIS1079:U.NE2/1
DG8:W.OP1/1 3.36 HIS1081:U.ND1/1
DG9:W.OP1/1 2.59 ASP508:U.OD2/1
DG9:W.OP2/1 2.47 ARG1122:S.NH2/1
DG10:W.OP1/1 2.66 ASP437:U.N/1
DG10:W.OP1/1 2.86 SER438:U.N/1
DG10:W.O3'/1 3.03 ARG458:U.NH1/1
DC11:W.OP1/1 2.98 ASP437:U.OD2/1
DC11:W.OP1/1 3.15 ARG458:U.NH2/1
DA15:W.OP2/1 3.26 ASN463:S.N/1
DC16:W.OP1/1 3.41 HIS515:S.NE2/1
DC16:W.OP2/1 2.49 ASN463:S.ND2/1
DG17:W.OP1/1 3.17 GLY1178:S.N/1
DG17:W.OP2/1 3.05 LYS466:S.NZ/1
DC19:W.OP1/1 2.86 ARG1238:S.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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