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Nucleic atom dist Protein atom
DA201:A.N7/1 3.08 GLN288:C.NE2/1
DA201:A.N6/1 2.99 GLN288:C.OE1/1
DT202:A.OP2/1 3.03 GLN298:C.NE2/1
DT202:A.O4/1 2.51 THR289:C.OG1/1
DG203:A.OP2/1 3.24 LYS391:C.NZ/1
DC204:A.OP1/1 2.55 SER343:C.OG/1
DA205:A.N7/1 2.88 ASN387:C.ND2/1
DA205:A.N6/1 2.67 ASN387:C.OD1/1
DC203:B.OP2/1 2.62 ARG382:C.NE/1
DT204:B.OP1/1 3.13 LYS361:C.NZ/1
DT204:B.OP2/1 2.47 ARG389:C.NH1/1
DC205:B.OP2/1 2.95 LYS393:C.NZ/1
DA206:B.OP2/1 2.71 SER300:C.OG/1
DA206:B.N7/1 2.91 GLN390:C.NE2/1
DA206:B.N6/1 3.02 GLN390:C.OE1/1
DT207:B.OP2/1 2.83 ASN303:C.ND2/1
DG208:B.OP2/1 3.06 SER287:C.N/1
DG208:B.OP2/1 2.76 SER287:C.OG/1
DG208:B.OP2/1 2.46 THR290:C.OG1/1
DG208:B.N7/1 3.01 ARG293:C.NH1/1
DG208:B.O6/1 2.68 ARG293:C.NH2/1
DC209:B.N4/1 2.83 THR289:C.OG1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA205:A.OP2/1 2.52 2003:A/1 2.68 VAL380:C.O/1
DT206:A.OP2/1 2.72 2016:C/1 2.64 GLU379:C.OE2/1
DT204:B.OP2/1 2.76 2001:B/1 3.15 CYS386:C.O/1
DT207:B.OP2/1 3.15 2014:C/1 2.69 ASN303:C.OD1/1
DG208:B.OP1/1 2.65 2005:B/1 2.89 VAL285:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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