Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
G1:B.O2'/1 3.34 GLN296:A.NE2/1
G2:B.OP1/1 2.92 LYS402:A.N/1
C3:B.OP1/1 2.87 ARG299:A.NE/1
U14:B.OP2/1 2.63 ARG361:A.NH2/1
C15:B.O2'/1 2.69 ASN354:A.OD1/1
C21:B.O3'/1 3.22 ARG310:A.NH2/1
C21:B.O2'/1 2.74 HIS396:A.NE2/1
G22:B.OP1/1 2.58 TYR392:A.OH/1
G22:B.OP2/1 3.14 LYS303:A.NZ/1
C23:B.OP1/1 2.73 HIS398:A.ND1/1
C31:B.O2'/1 3.08 TYR165:A.OH/1
C31:B.O2/1 2.59 TYR165:A.OH/1
A32:B.O2'/1 2.82 ASP291:A.OD1/1
C34:B.O5'/1 2.89 TYR99:A.OH/1
C34:B.O3'/1 2.54 ASP110:A.OD2/1
C34:B.O2'/1 2.95 ASP61:A.OD2/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
G1:B.O2'/1 3.03 449:A/1 2.66 ASP291:A.O/1
G1:B.N3/1 2.77 449:A/1 2.66 ASP291:A.O/1
G1:B.N3/1 2.77 449:A/1 3.23 ASN292:A.OD1/1
G2:B.O2'/1 3.11 531:A/1 2.84 ARG168:A.NH2/1
C15:B.N4/1 2.71 516:A/1 2.58 ARG373:A.NH2/1
G22:B.OP1/1 2.51 36:B/1 2.74 LYS303:A.O/1
G22:B.OP1/1 2.51 36:B/1 2.97 ARG310:A.NH2/1
G22:B.OP1/1 2.51 36:B/1 2.92 TYR392:A.OH/1
A33:B.OP1/1 2.59 37:B/1 3.03 ALA163:A.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text