Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA3:C.OP2/1 3.32 GLY273:A.N/1
DA3:C.N7/1 2.86 SER272:A.OG/1
DG4:C.N7/1 2.97 LYS274:A.N/1
DG4:C.O6/1 2.57 ASN275:A.ND2/1
DA5:C.N6/1 3.24 LYS274:A.O/1
DC7:C.O3'/1 3.33 ASN115:A.ND2/1
DC7:C.O2/1 3 ARG114:A.NE/1
DC7:C.N3/1 3.13 ARG114:A.NH2/1
DG9:C.OP1/1 2.62 TYR95:A.OH/1
DC18:D.OP2/1 3.38 LYS268:A.NZ/1
DC18:D.O3'/1 3.35 ARG254:A.NH2/1
DA19:D.OP1/1 3.17 ARG254:A.NE/1
DA19:D.OP1/1 2.64 TYR280:A.OH/1
DA19:D.OP2/1 2.62 THR278:A.OG1/1
3DR20:D.OP1/1 2.79 ASN173:A.ND2/1
3DR20:D.OP1/1 2.71 TYR253:A.OH/1
3DR20:D.OP2/1 3.29 ARG277:A.NE/1
3DR20:D.OP2/1 2.99 ARG277:A.NH2/1
DG21:D.OP1/1 2.75 LYS60:A.NZ/1
DG21:D.OP2/1 2.91 ASN173:A.N/1
DG21:D.OP2/1 2.83 ARG277:A.NH2/1
DT22:D.OP2/1 2.97 LYS60:A.NZ/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG9:C.OP1/1 3 2267:A/1 2.69 LYS94:A.NZ/1
DG10:C.OP1/1 2.59 2242:C/1 3.04 LYS94:A.NZ/1
DG10:C.OP1/1 2.59 2242:C/1 2.82 TYR95:A.OH/1
DA19:D.OP2/1 2.87 2159:A/1 3.35 ASN173:A.ND2/1
DA19:D.OP2/1 2.87 2159:A/1 2.97 THR278:A.N/1
DA19:D.N3/1 3.12 2197:A/1 2.91 ARG114:A.NH1/1
3DR20:D.OP2/1 3.1 2159:A/1 2.97 THR278:A.N/1
DT22:D.OP1/1 2.76 2085:D/1 3.03 THR81:A.OG1/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text