Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA-55:I.OP1/1 2.93 SER53:D.N/1
DT-54:I.OP2/1 3.17 ILE51:D.O/1
DA-44:I.OP2/1 2.91 ARG32:C.NH1/1
DG-43:I.OP1/1 2.89 ARG17:C.NE/1
DG-43:I.OP2/1 2.76 ARG17:C.NE/1
DG-43:I.OP2/1 2.55 ARG17:C.NH2/1
DT-42:I.OP1/1 3.36 LYS15:C.N/1
DT-42:I.OP1/1 2.99 LYS15:C.O/1
DT-42:I.OP2/1 2.74 ARG20:C.NH2/1
DT-42:I.OP2/1 2.52 LYS122:D.NZ/1
DG-34:I.OP1/1 3.05 SER84:D.N/1
DG-34:I.OP1/1 3.25 THR85:D.N/1
DG-34:I.OP2/1 3.04 SER84:D.N/1
DG-28:I.N2/1 3.38 ARG27:H.NH1/1
DG-28:I.N3/1 3.38 ARG27:H.NH1/1
DC-27:I.OP1/1 2.68 ARG26:H.NH2/1
DC-24:I.OP1/1 3.07 SER86:A.N/1
DC-24:I.OP1/1 3.12 SER86:A.OG/1
DA-23:I.OP1/1 2.65 ARG72:A.NH1/1
DA-23:I.OP1/1 2.87 PHE84:A.N/1
DA-23:I.OP2/1 3.03 ARG72:A.NH2/1
DA-23:I.O4'/1 3.38 ARG83:A.NH1/1
DA-13:I.OP1/1 2.53 ARG36:B.NH1/1
DT-4:I.O3'/1 3 ARG45:B.NH1/1
DG-3:I.OP1/1 3.27 VAL117:A.N/1
DG-3:I.OP1/1 2.85 THR118:A.N/1
DG-3:I.OP1/1 2.6 THR118:A.OG1/1
DT7:I.O5'/1 3.19 ILE46:F.O/1
DG8:I.OP1/1 2.48 ILE46:F.N/1
DG8:I.O3'/1 2.8 GLY44:E.N/1
DA9:I.OP1/1 2.75 GLY44:E.N/1
DA9:I.OP1/1 2.75 VAL46:E.N/1
DA9:I.N3/1 2.81 ARG40:E.NH2/1
DA10:I.OP1/1 3.11 TYR41:E.N/1
DT17:I.OP2/1 2.78 ARG69:E.NH1/1
DT17:I.O3'/1 3.08 ARG63:E.NH1/1
DT18:I.OP1/1 2.68 LYS64:E.N/1
DG24:I.O3'/1 2.88 LYS16:F.NZ/1
DG27:I.OP1/1 2.59 LYS79:F.NZ/1
DC28:I.OP2/1 2.61 LYS79:F.N/1
DA29:I.N3/1 3.05 ARG26:D.NH2/1
DG30:I.OP1/1 2.58 THR29:D.N/1
DG30:I.OP1/1 2.59 THR29:D.OG1/1
DG30:I.OP2/1 2.83 THR29:D.OG1/1
DA38:I.OP1/1 2.7 ALA45:G.N/1
DT39:I.OP1/1 2.86 ARG35:G.NH2/1
DT39:I.OP1/1 3.4 VAL43:G.N/1
DT45:I.O3'/1 2.71 LYS13:G.N/1
DT46:I.OP1/1 2.88 LYS13:G.O/1
DG49:I.OP1/1 2.75 SER33:H.N/1
DG49:I.OP1/1 2.97 SER33:H.O/1
DG49:I.O4'/1 3.07 ARG30:H.NH1/1
DG49:I.N2/1 3.24 LYS28:H.NZ/1
DG49:I.N3/1 3.26 LYS28:H.NZ/1
DT50:I.OP1/1 2.99 LYS31:H.N/1
DA51:I.OP1/1 2.99 ARG27:H.O/1
DC59:I.OP1/1 2.51 THR76:G.N/1
DC59:I.OP1/1 2.97 ARG77:G.N/1
DG71:I.OP1/1 2.85 ARG42:A.N/1
DA72:I.OP1/1 3.21 ARG42:A.NH1/1
DT-68:J.O3'/1 2.53 TYR41:A.OH/1
DA-55:J.OP1/1 3.04 SER53:H.N/1
DA-55:J.O3'/1 3.32 ARG77:G.NH2/1
DT-54:J.OP1/1 3.11 TYR39:H.OH/1
DA-44:J.OP2/1 2.64 ARG32:G.NE/1
DA-44:J.N3/1 2.77 LYS13:G.NZ/1
DT-42:J.OP1/1 2.59 ARG20:G.NH2/1
DG-35:J.O3'/1 2.78 THR85:H.OG1/1
DG-34:J.OP1/1 2.9 THR85:H.N/1
DG-34:J.OP1/1 2.71 THR85:H.OG1/1
DG-34:J.OP2/1 2.81 SER84:H.OG/1
DA-33:J.OP1/1 2.99 ARG83:H.NH2/1
DT-29:J.O2/1 3 ARG26:D.NH1/1
DG-28:J.O4'/1 3.17 ARG26:D.NH1/1
DA-23:J.OP1/1 3.18 PHE84:E.N/1
DA-23:J.OP2/1 3.13 ARG72:E.NH2/1
DA-23:J.O4'/1 3.35 ARG83:E.NH2/1
DT-22:J.OP1/1 3.06 HIS18:F.N/1
DA-13:J.OP1/1 2.74 ARG36:F.NH2/1
DA-13:J.OP2/1 3.27 ARG36:F.NH1/1
DG-3:J.OP1/1 2.82 VAL117:E.N/1
DG-3:J.OP1/1 3.14 THR118:E.OG1/1
DT7:J.OP1/1 2.98 GLY48:B.N/1
DG8:J.OP1/1 2.81 ILE46:B.N/1
DG8:J.O3'/1 3.12 GLY44:A.N/1
DA9:J.OP1/1 2.67 GLY44:A.N/1
DA9:J.OP1/1 2.83 VAL46:A.N/1
DA9:J.OP1/1 3.14 ALA47:A.N/1
DA9:J.N3/1 2.93 ARG40:A.NH2/1
DA10:J.OP1/1 2.76 TYR41:A.N/1
DC16:J.O3'/1 2.77 ARG63:A.NH2/1
DT17:J.OP1/1 2.76 ARG63:A.NH1/1
DT17:J.OP1/1 2.81 ARG69:A.NH2/1
DT17:J.OP2/1 3.31 ARG69:A.NH1/1
DT17:J.O4'/1 2.97 ARG63:A.NH2/1
DT18:J.OP2/1 2.89 LYS64:A.N/1
DC28:J.OP1/1 2.89 LYS79:B.N/1
DC28:J.OP1/1 2.82 THR80:B.OG1/1
DC28:J.OP2/1 2.77 LYS79:B.N/1
DT31:J.OP1/1 3.09 LYS25:H.NZ/1
DT39:J.OP1/1 2.56 ARG35:C.NH1/1
DT39:J.OP1/1 2.33 VAL43:C.N/1
DT39:J.OP2/1 2.74 ARG35:C.NH2/1
DG49:J.OP1/1 3.24 ARG29:C.NH2/1
DT50:J.OP1/1 2.73 LYS28:D.NZ/1
DT50:J.OP1/1 2.91 LYS31:D.N/1
DT50:J.OP1/1 2.92 LYS31:D.O/1
DT50:J.O2/1 2.79 LYS24:D.NZ/1
DA51:J.O4'/1 3.32 LYS24:D.NZ/1
DG52:J.OP1/1 2.92 ASP22:D.O/1
DG58:J.O3'/1 3.08 ARG77:C.NH1/1
DG71:J.OP1/1 2.89 ARG42:E.N/1
DG71:J.OP1/1 3.1 THR45:E.OG1/1
DT73:J.OP1/1 2.92 GLY34:E.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text