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Nucleic atom dist Protein atom
DG6:B.N2/1 3.18 SER400:A.O/1
DT7:B.OP1/1 2.71 THR402:A.OG1/1
DT7:B.OP2/1 2.94 PHE235:A.N/1
DG8:B.OP1/1 3.09 ARG397:A.NH1/1
DG8:B.O4'/1 3.09 SER400:A.OG/1
DG8:B.N7/1 2.89 ARG234:A.NH2/1
DG8:B.O6/1 2.75 ARG234:A.NH1/1
DG10:B.O6/1 2.61 LYS368:A.NZ/1
DT5:C.OP1/1 3.07 SER370:A.OG/1
DT6:C.OP2/1 2.65 SER367:A.OG/1
DT7:C.OP2/1 2.81 LYS227:A.NZ/1
DT7:C.OP2/1 2.45 TYR229:A.OH/1
DA13:C.N3/1 3.28 GLN401:A.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:B.OP2/1 2.57 36:B/1 2.97 LYS233:A.N/1
DT7:B.OP2/1 2.84 671:A/1 2.53 PHE235:A.O/1
DT6:C.OP2/1 2.63 24:C/1 3.34 SER367:A.N/1
DC9:C.N4/1 2.84 19:C/1 2.92 GLU232:A.OE1/1
DC9:C.N4/1 2.84 19:C/1 3.06 GLU232:A.OE2/1
DC9:C.N4/1 2.84 19:C/1 3.4 ARG234:A.NH1/1
DG14:C.OP1/1 2.59 17:C/1 3.15 LEU398:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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