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Nucleic atom dist Protein atom
DA6:T.OP2/1 3.35 LYS280:A.NZ/1
DA6:T.N7/1 2.69 LYS280:A.NZ/1
DA6:T.N3/1 3.34 ARG283:A.NH1/1
DG7:T.OP1/1 2.9 THR292:A.OG1/1
DC8:T.OP1/1 3.32 ASN294:A.ND2/1
DG9:T.OP1/1 2.53 TYR296:A.OH/1
DG9:T.N3/1 2.97 LYS234:A.NZ/1
DC10:T.OP1/1 2.93 THR233:A.N/1
DC10:T.OP1/1 2.88 LYS234:A.N/1
DC10:T.O3'/1 3.36 LYS230:A.N/1
DA11:T.OP1/1 3.01 LYS230:A.N/1
DA11:T.OP1/1 3.15 LYS230:A.O/1
DC8:P.OP1/1 3.06 GLY107:A.N/1
DC8:P.OP1/1 2.7 ALA110:A.N/1
DC8:P.OP2/1 2.99 SER109:A.N/1
DG9:P.OP1/1 2.71 GLY105:A.N/1
DC10:P.OP1/1 2.83 ARG254:A.NH2/1
DC10:P.O3'/1 2.88 ASP256:A.OD2/1
DC10:P.O2/1 2.66 TYR271:A.OH/1
DG1:D.OP1/1 3.21 LYS68:A.NZ/1
DT2:D.OP1/1 2.71 GLY66:A.N/1
DT2:D.OP1/1 2.91 ILE69:A.N/1
DT2:D.OP2/1 3.34 LYS68:A.N/1
DC3:D.OP1/1 2.78 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA6:T.N6/1 3.12 375:A/1 2.61 LYS280:A.NZ/1
DG7:T.N2/1 3.02 383:A/1 3.34 ARG258:A.NH1/1
DG7:T.N2/1 3.02 383:A/1 2.66 GLU295:A.OE2/1
DG7:T.N3/1 2.88 380:A/1 2.83 ARG283:A.NH1/1
DG7:T.N3/1 2.88 380:A/1 2.71 GLU295:A.OE1/1
DC8:T.OP1/1 2.9 529:A/1 2.92 ARG299:A.NH2/1
DG9:T.N2/1 3.02 389:A/1 2.48 LYS234:A.NZ/1
DC10:T.OP2/1 2.68 358:T/1 3.45 GLU232:A.N/1
DA11:T.O3'/1 3.22 354:T/1 3.15 HIS135:A.N/1
DT12:T.OP1/1 2.89 445:A/1 2.78 HIS134:A.N/1
DT12:T.OP1/1 2.98 354:T/1 3.15 HIS135:A.N/1
DG9:P.N3/1 3.18 353:A/1 2.56 LYS234:A.NZ/1
DC10:P.OP1/1 2.96 352:A/1 2.98 ASP190:A.OD2/1
DC10:P.O4'/1 2.82 353:A/1 2.56 LYS234:A.NZ/1
DC10:P.O3'/1 2.76 352:A/1 2.98 ASP190:A.OD2/1
DG1:D.OP1/1 3.21 525:A/1 2.55 LYS72:A.NZ/1
DG1:D.OP1/1 2.59 49:D/1 2.94 LYS72:A.NZ/1
DG1:D.OP2/1 2.57 127:D/1 3.37 LYS35:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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