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Nucleic atom dist Protein atom
DT4:A.OP1/1 2.83 ARG10:R.NH1/1
DT4:A.OP2/1 2.45 THR16:R.OG1/1
DT4:A.OP2/1 3.09 GLN17:R.N/1
DA5:A.OP2/1 2.78 GLN17:R.NE2/1
DA5:A.N7/1 3.21 GLN28:R.NE2/1
DA5:A.N6/1 3.39 GLN28:R.OE1/1
DA5:A.N6/1 2.93 GLN29:R.NE2/1
DT13:A.OP1/1 3.24 LYS40:L.N/1
DT13:A.OP1/1 2.75 ARG41:L.N/1
DC14:A.OP1/1 2.61 ARG43:L.N/1
DT15:A.OP2/1 3.4 LYS27:L.N/1
DT15:A.OP2/1 2.34 SER30:L.OG/1
DT16:A.OP2/1 2.75 LYS27:L.NZ/1
DT3:B.OP1/1 3.36 ARG10:L.NH1/1
DT3:B.OP2/1 2.82 GLN17:L.N/1
DA4:B.N7/1 3.22 GLN28:L.NE2/1
DA4:B.N6/1 3.33 GLN29:L.NE2/1
DG12:B.OP1/1 2.69 ARG41:R.N/1
DG12:B.OP2/1 3.35 LYS40:R.N/1
DT13:B.OP1/1 2.66 ARG43:R.N/1
DG16:B.O6/1 3 GLN29:R.NE2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:B.OP2/1 2.7 78:L/1 3.22 GLN17:L.N/1
DT3:B.OP2/1 2.7 78:L/1 2.52 THR18:L.OG1/1
DT17:B.O4/1 2.34 23:B/1 3.24 GLN29:R.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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